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1RYH
Biol. Unit 2
Info
Asym.Unit (67 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (32 KB)
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(1)
Title
:
ALTERNATIVE SPLICING OF RAC1 GENERATES RAC1B, A SELF-ACTIVATING GTPASE
Authors
:
M. R. Ahmadian, D. Fiegen
Date
:
22 Dec 03 (Deposition) - 27 Jan 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Gtp Binding, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Fiegen, L. C. Haeusler, L. Blumenstein, U. Herbrand, R. Dvorsky, I. R. Vetter, M. R. Ahmadian
Alternative Splicing Of Rac1 Generates Rac1B, A Self-Activating Gtpase
J. Biol. Chem. V. 279 4743 2004
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GNP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(3, 3)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
THR B:17 , GNP B:1538 , HOH B:1540 , HOH B:1541 , HOH B:1612
BINDING SITE FOR RESIDUE MG B 1539
2
AC3
SOFTWARE
GLY A:12 , ALA A:13 , VAL A:14 , GLY A:15 , LYS A:16 , THR A:17 , CYS A:18 , PHE A:28 , GLY A:60 , LYS A:135 , ASP A:137 , LEU A:138 , SER A:177 , ALA A:178 , LEU A:179 , MG A:539 , HOH A:540 , HOH A:541 , HOH A:600 , HOH A:601 , HOH A:606 , HOH A:609 , HOH A:625 , HOH A:640 , HOH B:1690
BINDING SITE FOR RESIDUE GNP A 538
3
AC4
SOFTWARE
GLY B:12 , ALA B:13 , VAL B:14 , GLY B:15 , LYS B:16 , THR B:17 , CYS B:18 , PHE B:28 , LYS B:135 , ASP B:137 , LEU B:138 , SER B:177 , ALA B:178 , LEU B:179 , MG B:1539 , HOH B:1540 , HOH B:1541 , HOH B:1550 , HOH B:1612 , HOH B:1614 , HOH B:1652 , HOH B:1663 , HOH B:1682 , HOH B:1683 , HOH B:1687
BINDING SITE FOR RESIDUE GNP B 1538
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SAPs(SNPs)/Variants
(9, 9)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_014540 (N26D, chain B, )
2: VAR_014541 (F28L, chain B, )
3: VAR_014545 (V112G, chain B, )
4: VAR_014544 (V112I, chain B, )
5: VAR_014546 (T127I, chain B, )
6: VAR_014547 (K149R, chain B, )
7: VAR_014548 (K152E, chain B, )
8: VAR_033303 (T154I, chain B, )
9: VAR_014549 (P199S, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_014540
N
26
D
RAC1_HUMAN
Polymorphism
5830
B
N
26
D
02
UniProt
VAR_014541
F
28
L
RAC1_HUMAN
Polymorphism
5832
B
F
28
L
04
UniProt
VAR_014545
V
93
G
RAC1_HUMAN
Polymorphism
5826
B
V
112
G
05
UniProt
VAR_014544
V
93
I
RAC1_HUMAN
Polymorphism
5825
B
V
112
I
06
UniProt
VAR_014546
T
108
I
RAC1_HUMAN
Polymorphism
5838
B
T
127
I
07
UniProt
VAR_014547
K
130
R
RAC1_HUMAN
Polymorphism
5828
B
K
149
R
08
UniProt
VAR_014548
K
133
E
RAC1_HUMAN
Polymorphism
5835
B
K
152
E
09
UniProt
VAR_033303
T
135
I
RAC1_HUMAN
Polymorphism
11540455
B
T
154
I
10
UniProt
VAR_014549
P
180
S
RAC1_HUMAN
Polymorphism
16063
B
P
199
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RHO (B:1-195)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RHO
PS51420
small GTPase Rho family profile.
RAC1_HUMAN
1-176
1
-
B:1-195
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1ryha_ (A:)
1b: SCOP_d1ryhb_ (B:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Rac
(17)
Human (Homo sapiens) [TaxId: 9606]
(17)
1a
d1ryha_
A:
1b
d1ryhb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1ryhA00 (A:1A-201)
1b: CATH_1ryhB00 (B:1A-199)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
1ryhA00
A:1A-201
1b
1ryhB00
B:1A-199
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Ras_1ryhB01 (B:5-197)
1b: PFAM_Ras_1ryhB02 (B:5-197)
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(
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)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Ras
(176)
Homo sapiens (Human)
(141)
1a
Ras-1ryhB01
B:5-197
1b
Ras-1ryhB02
B:5-197
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Chain B
Asymmetric Unit 1
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Asym.Unit (67 KB)
Header - Asym.Unit
Biol.Unit 1 (32 KB)
Header - Biol.Unit 1
Biol.Unit 2 (32 KB)
Header - Biol.Unit 2
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