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1RS7
Asym. Unit
Info
Asym.Unit (157 KB)
Biol.Unit 1 (151 KB)
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(1)
Title
:
RAT NEURONAL NOS HEME DOMAIN WITH D-PHENYLALANINE-D-NITROARGININE AMIDE BOUND
Authors
:
M. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, R. B. Silverman, T. L. Po
Date
:
09 Dec 03 (Deposition) - 18 May 04 (Release) - 21 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitric Oxide Synthase, Oxidoreductase, Heme-Enzyme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, R. B. Silverman, T. L. Poulos
Structures Of The Neuronal And Endothelial Nitric Oxide Synthase Heme Domain With D-Nitroarginine-Containing Dipeptide Inhibitors Bound.
Biochemistry V. 43 5181 2004
(for further references see the
PDB file header
)
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Hetero Components
(6, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: D-PHENYLALANYL-N~5~-[(2,2-DIHYDROX... (D7Pa)
2b: D-PHENYLALANYL-N~5~-[(2,2-DIHYDROX... (D7Pb)
3a: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Ba)
3b: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Bb)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
5a: D-MANNITOL (MTLa)
6a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
D7P
2
Ligand/Ion
D-PHENYLALANYL-N~5~-[(2,2-DIHYDROXYHYDRAZINO)(IMINO)METHYL]-D-ORNITHINAMIDE
3
H4B
2
Ligand/Ion
5,6,7,8-TETRAHYDROBIOPTERIN
4
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
MTL
1
Ligand/Ion
D-MANNITOL
6
ZN
1
Ligand/Ion
ZINC ION
[
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]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER B:477 , ALA B:497 , ASN B:498 , GLN B:500 , PHE B:501 , ASN B:569 , ASP B:709 , TRP B:711 , HOH B:977 , HOH B:1012 , HOH B:1046
BINDING SITE FOR RESIDUE MTL B 871
02
AC2
SOFTWARE
TRP A:587 , SER A:657 , HEM A:750
BINDING SITE FOR RESIDUE ACT A 860
03
AC3
SOFTWARE
GLY B:417 , ILE B:419 , GLN B:420 , TRP B:587 , HOH B:1157
BINDING SITE FOR RESIDUE ACT B 861
04
AC4
SOFTWARE
CYS A:326 , CYS A:331 , CYS B:326 , CYS B:331
BINDING SITE FOR RESIDUE ZN A 900
05
AC5
SOFTWARE
TRP A:409 , CYS A:415 , SER A:457 , PHE A:584 , SER A:585 , GLY A:586 , TRP A:587 , MET A:589 , GLU A:592 , TRP A:678 , TYR A:706 , H4B A:760 , D7P A:797 , ACT A:860 , HOH A:907 , HOH A:929 , HOH A:940
BINDING SITE FOR RESIDUE HEM A 750
06
AC6
SOFTWARE
SER A:334 , MET A:336 , ARG A:596 , VAL A:677 , TRP A:678 , HEM A:750 , HOH A:901 , HOH A:907 , HOH A:910 , HOH A:916 , HOH A:961 , TRP B:676 , PHE B:691 , HIS B:692 , GLN B:693 , GLU B:694
BINDING SITE FOR RESIDUE H4B A 760
07
AC7
SOFTWARE
LEU A:337 , GLN A:478 , ARG A:481 , PRO A:565 , VAL A:567 , SER A:585 , GLY A:586 , TRP A:587 , GLU A:592 , TYR A:706 , HEM A:750 , HOH A:907 , HOH A:969 , HOH A:989 , HOH A:1083 , TRP B:306
BINDING SITE FOR RESIDUE D7P A 797
08
AC8
SOFTWARE
TRP B:409 , CYS B:415 , PHE B:584 , SER B:585 , TRP B:587 , GLU B:592 , TRP B:678 , PHE B:704 , TYR B:706 , H4B B:761 , D7P B:798 , HOH B:872 , HOH B:875 , HOH B:885 , HOH B:909 , HOH B:986
BINDING SITE FOR RESIDUE HEM B 750
09
AC9
SOFTWARE
TRP A:676 , PHE A:691 , HIS A:692 , GLN A:693 , GLU A:694 , SER B:334 , ARG B:596 , VAL B:677 , TRP B:678 , HEM B:750 , HOH B:875 , HOH B:878 , HOH B:887 , HOH B:900 , HOH B:1049
BINDING SITE FOR RESIDUE H4B B 761
10
BC1
SOFTWARE
GLN B:478 , ARG B:481 , PRO B:565 , VAL B:567 , PHE B:584 , SER B:585 , GLY B:586 , TRP B:587 , GLU B:592 , TYR B:706 , HEM B:750 , HOH B:875 , HOH B:950 , HOH B:986 , HOH B:1004 , HOH B:1125 , HOH B:1126
BINDING SITE FOR RESIDUE D7P B 798
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:414-421,B:414-421)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS1_RAT
414-421
2
A:414-421
B:414-421
[
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1rs7a_ (A:)
1b: SCOP_d1rs7b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(154)
1a
d1rs7a_
A:
1b
d1rs7b_
B:
[
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1rs7A03 (A:543-565,A:588-653)
1b: CATH_1rs7B03 (B:543-565,B:588-653)
2a: CATH_1rs7B01 (B:314-430,B:457-467,B:571-585,B:655-679)
2b: CATH_1rs7A01 (A:314-430,A:457-467,A:571-585,A:655-679)
3a: CATH_1rs7A02 (A:431-456,A:471-542,A:706-710)
3b: CATH_1rs7B02 (B:431-456,B:471-542,B:706-710)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 3
(105)
Norway rat (Rattus norvegicus)
(25)
1a
1rs7A03
A:543-565,A:588-653
1b
1rs7B03
B:543-565,B:588-653
Topology
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Norway rat (Rattus norvegicus)
(25)
2a
1rs7B01
B:314-430,B:457-467,B:571-585,B:655-679
2b
1rs7A01
A:314-430,A:457-467,A:571-585,A:655-679
Topology
:
Nitric Oxide Synthase;Heme Domain; Chain A, domain 2
(105)
Homologous Superfamily
:
Nitric Oxide Synthase;Heme Domain;Chain A domain 2
(105)
Norway rat (Rattus norvegicus)
(25)
3a
1rs7A02
A:431-456,A:471-542,A:706-710
3b
1rs7B02
B:431-456,B:471-542,B:706-710
[
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]
Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_NO_synthase_1rs7B01 (B:348-717)
1b: PFAM_NO_synthase_1rs7B02 (B:348-717)
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Clan
:
no clan defined [family: NO_synthase]
(140)
Family
:
NO_synthase
(140)
Rattus norvegicus (Rat)
(79)
1a
NO_synthase-1rs7B01
B:348-717
1b
NO_synthase-1rs7B02
B:348-717
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