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1ROC
Asym. Unit
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Asym.Unit (33 KB)
Biol.Unit 1 (29 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HISTONE DEPOSITION PROTEIN ASF1
Authors
:
S. M. Daganzo, J. P. Erzberger, W. M. Lam, E. Skordalakes, R. Zhang, A. A. S. J. Brill, P. D. Adams, J. M. Berger, P. D. Kaufman
Date
:
02 Dec 03 (Deposition) - 23 Dec 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Beta-Sandwich, Replication, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Daganzo, J. P. Erzberger, W. M. Lam, E. Skordalakes, R. Zhang, A. A. Franco, S. J. Brill, P. D. Adams, J. M. Berger, P. D. Kaufman
Structure And Function Of The Conserved Core Of Histone Deposition Protein Asf1.
Curr. Biol. V. 13 2148 2003
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Hetero Components
(1, 9)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
1b: BROMIDE ION (BRb)
1c: BROMIDE ION (BRc)
1d: BROMIDE ION (BRd)
1e: BROMIDE ION (BRe)
1f: BROMIDE ION (BRf)
1g: BROMIDE ION (BRg)
1h: BROMIDE ION (BRh)
1i: BROMIDE ION (BRi)
View:
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No.
Name
Count
Type
Full Name
1
BR
9
Ligand/Ion
BROMIDE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:145
BINDING SITE FOR RESIDUE BR A 201
2
AC2
SOFTWARE
LYS A:35 , TYR A:117
BINDING SITE FOR RESIDUE BR A 202
3
AC3
SOFTWARE
LEU A:140 , GLU A:142
BINDING SITE FOR RESIDUE BR A 203
4
AC4
SOFTWARE
HIS A:134 , ASN A:150 , ILE A:151 , TRP A:153 , HOH A:344
BINDING SITE FOR RESIDUE BR A 204
5
AC5
SOFTWARE
LEU A:61 , HOH A:324
BINDING SITE FOR RESIDUE BR A 205
6
AC6
SOFTWARE
ASN A:150 , HOH A:343
BINDING SITE FOR RESIDUE BR A 206
7
AC7
SOFTWARE
PRO A:64 , ASP A:118 , ARG A:123
BINDING SITE FOR RESIDUE BR A 207
8
AC8
SOFTWARE
ARG A:104 , VAL A:152
BINDING SITE FOR RESIDUE BR A 208
9
AC9
SOFTWARE
GLY A:0 , ALA A:1
BINDING SITE FOR RESIDUE BR A 209
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(1, 1)
Info
All Exons
Exon 1.1 (A:1-154)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YJL115W
1
YJL115W.1
X:196284-197123
840
ASF1_YEAST
1-279
279
1
A:1-154
154
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1roca_ (A:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
ASF1-like
(13)
Family
:
ASF1-like
(13)
Protein domain
:
Anti-silencing protein 1, ASF1
(11)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(3)
1a
d1roca_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1rocA00 (A:0-154)
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)
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Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
ASF1-like
(13)
Baker's yeast (Saccharomyces cerevisiae)
(4)
1a
1rocA00
A:0-154
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_ASF1_hist_chap_1rocA01 (A:2-154)
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Clans
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Clan
:
ASF1-like
(4)
Family
:
ASF1_hist_chap
(4)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
1a
ASF1_hist_chap-1rocA01
A:2-154
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Chain A
Asymmetric Unit 1
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Asym.Unit (33 KB)
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