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1RNZ
Asym. Unit
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Asym.Unit (25 KB)
Biol.Unit 1 (22 KB)
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(1)
Title
:
RIBONUCLEASE A CRYSTALLIZED FROM 2.5M SODIUM CHLORIDE, 3.3M SODIUM FORMATE
Authors
:
A. A. Fedorov, D. Josph-Mccarthy, E. V. Fedorov, D. Sirakova, I. Graf, S. C. Almo
Date
:
08 Nov 96 (Deposition) - 01 Apr 97 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Nuclease, Endonuclease, Glycoprotein, Signal
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. A. Fedorov, D. Joseph-Mccarthy, E. Fedorov, D. Sirakova, I. Graf, S. C. Almo
Ionic Interactions In Crystalline Bovine Pancreatic Ribonuclease A.
Biochemistry V. 35 15962 1996
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:10 , ASN A:34 , THR A:78
BINDING SITE FOR RESIDUE CL A 126
2
AC2
SOFTWARE
THR A:45
BINDING SITE FOR RESIDUE CL A 127
3
AC3
SOFTWARE
THR A:3 , HOH A:219
BINDING SITE FOR RESIDUE CL A 128
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: RNASE_PANCREATIC (A:40-46)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
RNAS1_BOVIN
66-72
1
A:40-46
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Exons
(1, 1)
Info
All Exons
Exon 1.2 (A:1-124)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000011586
1
ENSBTAE00000400684
chr10:
25757929-25757973
45
RNAS1_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000011586
2
ENSBTAE00000093931
chr10:
25758709-25759510
802
RNAS1_BOVIN
1-159
159
1
A:1-124
124
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1rnza_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
Ribonuclease A (also ribonuclease B, S)
(173)
Cow (Bos taurus) [TaxId: 9913]
(164)
1a
d1rnza_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1rnzA00 (A:1-124)
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Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
P-30 Protein
(299)
Homologous Superfamily
:
P-30 Protein
(299)
Cattle (Bos taurus)
(152)
1a
1rnzA00
A:1-124
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_RnaseA_1rnzA01 (A:1-121)
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Clans
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Clan
:
no clan defined [family: RnaseA]
(125)
Family
:
RnaseA
(125)
Bos taurus (Bovine)
(107)
1a
RnaseA-1rnzA01
A:1-121
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Asymmetric Unit 1
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