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1RII
Asym. Unit
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Asym.Unit (164 KB)
Biol.Unit 1 (159 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM M. TUBERCULOSIS
Authors
:
P. Mueller, M. R. Sawaya, S. Chan, Y. Wu, I. Pashkova, J. Perry, D. Eisenb Structural Genomics Consortium (Tbsgc)
Date
:
17 Nov 03 (Deposition) - 05 Oct 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Phosphoglyerate Mutase, Sh3 Domain Binding, Structural Genomics, Tbsgc, Protein Structure Initiative, Psi, Tb Structural Genomics Consortium, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Muller, M. R. Sawaya, I. Pashkov, S. Chan, C. Nguyen, Y. Wu, L. J. Perry, D. Eisenberg
The 1. 70 Angstroms X-Ray Crystal Structure Of Mycobacterium Tuberculosis Phosphoglycerate Mutase.
Acta Crystallogr. , Sect. D V. 61 309 2005
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
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No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
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Sites
(5, 5)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:12 , SER A:15 , ASN A:18 , THR A:24 , ARG A:63 , GLU A:90 , HOH A:622
BINDING SITE FOR RESIDUE GOL A 501
2
AC2
SOFTWARE
HIS B:12 , SER B:15 , ASN B:18 , THR B:24 , ARG B:63 , GLU B:90 , HIS B:183 , HOH B:607 , HOH B:1001
BINDING SITE FOR RESIDUE GOL B 502
3
AC3
SOFTWARE
HIS D:12 , SER D:15 , ASN D:18 , THR D:24 , ARG D:63 , GLU D:90 , HIS D:183 , HOH D:636 , HOH D:814
BINDING SITE FOR RESIDUE GOL D 503
4
AC4
SOFTWARE
GLN D:132 , HOH D:939
BINDING SITE FOR RESIDUE GOL D 504
5
AC5
SOFTWARE
ARG C:83 , TYR D:57 , ARG D:83 , VAL D:167 , HOH D:888
BINDING SITE FOR RESIDUE GOL D 505
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: PG_MUTASE (A:9-18,B:9-18,C:9-18,D:9-18,A:9-18...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PG_MUTASE
PS00175
Phosphoglycerate mutase family phosphohistidine signature.
GPMA_MYCTO
9-18
4
A:9-18
B:9-18
C:9-18
D:9-18
GPMA_MYCTU
9-18
4
A:9-18
B:9-18
C:9-18
D:9-18
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1riia_ (A:)
1b: SCOP_d1riib_ (B:)
1c: SCOP_d1riic_ (C:)
1d: SCOP_d1riid_ (D:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphoglycerate mutase-like
(103)
Superfamily
:
Phosphoglycerate mutase-like
(103)
Family
:
Cofactor-dependent phosphoglycerate mutase
(57)
Protein domain
:
Phosphoglycerate mutase
(12)
Mycobacterium tuberculosis [TaxId: 1773]
(1)
1a
d1riia_
A:
1b
d1riib_
B:
1c
d1riic_
C:
1d
d1riid_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1riiD00 (D:3-233)
1b: CATH_1riiB00 (B:3-239)
1c: CATH_1riiC00 (C:2-238)
1d: CATH_1riiA00 (A:2-244)
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)
Organisms
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)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Phosphoglycerate mutase-like
(91)
Mycobacterium tuberculosis. Organism_taxid: 1773.
(1)
1a
1riiD00
D:3-233
1b
1riiB00
B:3-239
1c
1riiC00
C:2-238
1d
1riiA00
A:2-244
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_His_Phos_1_1riiD01 (D:6-190)
1b: PFAM_His_Phos_1_1riiD02 (D:6-190)
1c: PFAM_His_Phos_1_1riiD03 (D:6-190)
1d: PFAM_His_Phos_1_1riiD04 (D:6-190)
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Clan
:
PGM
(50)
Family
:
His_Phos_1
(31)
Mycobacterium tuberculosis
(1)
1a
His_Phos_1-1riiD01
D:6-190
1b
His_Phos_1-1riiD02
D:6-190
1c
His_Phos_1-1riiD03
D:6-190
1d
His_Phos_1-1riiD04
D:6-190
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Asymmetric Unit 1
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