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1RB6
Asym. Unit
Info
Asym.Unit (27 KB)
Biol.Unit 1 (22 KB)
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(1)
Title
:
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TETRAGONAL FORM
Authors
:
J. Holton, T. Alber
Date
:
01 Nov 03 (Deposition) - 13 Jan 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Coiled Coil, Peptide, Leucine Zipper, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Holton, T. Alber
Automated Protein Crystal Structure Determination Using Elves.
Proc. Natl. Acad. Sci. Usa V. 101 1537 2004
(for further references see the
PDB file header
)
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
1c: ACETYL GROUP (ACEc)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
3
Mod. Amino Acid
ACETYL GROUP
2
CL
8
Ligand/Ion
CHLORIDE ION
3
K
2
Ligand/Ion
POTASSIUM ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH B:922 , GLU C:22
BINDING SITE FOR RESIDUE K C 801
02
AC2
SOFTWARE
LYS A:8 , GLU B:10 , ASN C:21 , GLU C:22 , ARG C:25
BINDING SITE FOR RESIDUE K B 802
03
AC3
SOFTWARE
LYS B:15 , GLU C:11 , LYS C:15 , HOH C:904
BINDING SITE FOR RESIDUE CL B 803
04
AC4
SOFTWARE
LYS A:15 , GLU B:20 , HOH B:934
BINDING SITE FOR RESIDUE CL B 804
05
AC5
SOFTWARE
LYS B:8 , LYS C:15 , HOH C:908 , HOH C:925
BINDING SITE FOR RESIDUE CL B 805
06
AC6
SOFTWARE
ARG A:25 , LYS B:27
BINDING SITE FOR RESIDUE CL A 806
07
AC7
SOFTWARE
GLU A:32 , ARG A:33
BINDING SITE FOR RESIDUE CL A 808
08
AC8
SOFTWARE
HIS B:18 , ASN B:21 , ARG B:25 , HOH B:907
BINDING SITE FOR RESIDUE CL B 809
09
AC9
SOFTWARE
GLU A:10 , ASN B:21
BINDING SITE FOR RESIDUE CL A 810
10
BC1
SOFTWARE
HOH B:917 , HOH C:904
BINDING SITE FOR RESIDUE CL B 811
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(1, 3)
Info
All Exons
Exon 1.1 (A:0-33 | B:0-33 | C:0-31)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YEL009C
1
YEL009C.1
V:139763-138918
846
GCN4_YEAST
1-281
281
3
A:0-33
B:0-33
C:0-31
34
34
32
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1rb6a_ (A:)
1b: SCOP_d1rb6b_ (B:)
1c: SCOP_d1rb6c_ (C:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Leucine zipper domain
(105)
Family
:
Leucine zipper domain
(105)
Protein domain
:
GCN4
(64)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(63)
1a
d1rb6a_
A:
1b
d1rb6b_
B:
1c
d1rb6c_
C:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain C
Asymmetric Unit 1
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Asym.Unit (27 KB)
Header - Asym.Unit
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