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1R5B
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Asym.Unit (75 KB)
Biol.Unit 1 (69 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF SUP35
Authors
:
C. Kong, H. Song
Date
:
10 Oct 03 (Deposition) - 25 May 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Translation Termination, Peptide Release, Gtpase, Translation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Kong, K. Ito, M. A. Walsh, M. Wada, Y. Liu, S. Kumar, D. Barford, Y. Nakamura, H. Song
Crystal Structure And Functional Analysis Of The Eukaryotic Class Ii Release Factor Erf3 From S. Pombe
Mol. Cell V. 14 233 2004
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Hetero Components
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1r5ba2 (A:555-622)
2a: SCOP_d1r5ba1 (A:460-554)
3a: SCOP_d1r5ba3 (A:215-459)
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Protein Domains
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)
(
)
Organisms
(
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Elongation factor/aminomethyltransferase common domain
(82)
Superfamily
:
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
(67)
Family
:
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
(48)
Protein domain
:
Eukaryotic peptide chain release factor ERF2, C-terminal domain
(3)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(3)
1a
d1r5ba2
A:555-622
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Translation proteins
(218)
Family
:
Elongation factors
(77)
Protein domain
:
Eukaryotic peptide chain release factor ERF2, post-G domain
(3)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(3)
2a
d1r5ba1
A:460-554
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Eukaryotic peptide chain release factor ERF2, G domain
(3)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(3)
3a
d1r5ba3
A:215-459
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CATH Domains
(2, 3)
Info
all CATH domains
1a: CATH_1r5bA01 (A:215-463)
2a: CATH_1r5bA03 (A:553-662)
2b: CATH_1r5bA02 (A:464-552)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Fission yeast (Schizosaccharomyces pombe)
(5)
1a
1r5bA01
A:215-463
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Fission yeast (Schizosaccharomyces pombe)
(4)
2a
1r5bA03
A:553-662
2b
1r5bA02
A:464-552
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_GTP_EFTU_1r5bA01 (A:236-484)
2a: PFAM_GTP_EFTU_D2_1r5bA02 (A:481-548)
3a: PFAM_GTP_EFTU_D3_1r5bA03 (A:553-661)
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Clan
:
P-loop_NTPase
(1112)
Family
:
GTP_EFTU
(39)
Schizosaccharomyces pombe (strain ATCC 38366 / 972) (Fission yeast)
(4)
1a
GTP_EFTU-1r5bA01
A:236-484
Clan
:
no clan defined [family: GTP_EFTU_D2]
(39)
Family
:
GTP_EFTU_D2
(39)
Schizosaccharomyces pombe (strain ATCC 38366 / 972) (Fission yeast)
(4)
2a
GTP_EFTU_D2-1r5bA02
A:481-548
Clan
:
no clan defined [family: GTP_EFTU_D3]
(11)
Family
:
GTP_EFTU_D3
(11)
Schizosaccharomyces pombe (strain ATCC 38366 / 972) (Fission yeast)
(4)
3a
GTP_EFTU_D3-1r5bA03
A:553-661
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