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1R4I
Biol. Unit 1
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Asym.Unit (43 KB)
Biol.Unit 1 (38 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT
Authors
:
P. L. Shaffer, A. Jivan, D. E. Dollins, F. Claessens, D. T. Gewirth
Date
:
06 Oct 03 (Deposition) - 29 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Ar, Steroid Receptor, Protein-Dna Complex, Androgen, Transcription/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. L. Shaffer, A. Jivan, D. E. Dollins, F. Claessens, D. T. Gewirth
Structural Basis Of Androgen Receptor Binding To Selective Androgen Response Elements.
Proc. Natl. Acad. Sci. Usa V. 101 4758 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
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Sites
(4, 4)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:542 , CYS A:545 , CYS A:559 , CYS A:562
BINDING SITE FOR RESIDUE ZN A 650
2
AC2
SOFTWARE
CYS A:578 , CYS A:584 , CYS A:594 , CYS A:597
BINDING SITE FOR RESIDUE ZN A 651
3
AC3
SOFTWARE
CYS B:542 , CYS B:545 , CYS B:559 , CYS B:562
BINDING SITE FOR RESIDUE ZN B 652
4
AC4
SOFTWARE
CYS B:578 , CYS B:584 , CYS B:594 , CYS B:597
BINDING SITE FOR RESIDUE ZN B 653
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 3)
Info
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1: NUCLEAR_REC_DBD_2 (A:539-611)
2: NUCLEAR_REC_DBD_1 (A:542-568,B:542-568)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NUCLEAR_REC_DBD_2
PS51030
Nuclear hormone receptors DNA-binding domain profile.
ANDR_RAT
539-614
1
A:539-611
2
NUCLEAR_REC_DBD_1
PS00031
Nuclear hormones receptors DNA-binding region signature.
ANDR_RAT
542-568
2
A:542-568
B:542-568
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Exons
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SCOP Domains
(1, 2)
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1a: SCOP_d1r4ia_ (A:)
1b: SCOP_d1r4ib_ (B:)
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Class
:
Small proteins
(3458)
Fold
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Superfamily
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Family
:
Nuclear receptor
(49)
Protein domain
:
Androgen receptor
(1)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
1a
d1r4ia_
A:
1b
d1r4ib_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1r4iB00 (B:540-610)
1b: CATH_1r4iA00 (A:538-611)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Erythroid Transcription Factor GATA-1; Chain A
(61)
Homologous Superfamily
:
Erythroid Transcription Factor GATA-1, subunit A
(61)
[unclassified]
(30)
1a
1r4iB00
B:540-610
1b
1r4iA00
A:538-611
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_zf_C4_1r4iB01 (B:540-609)
1b: PFAM_zf_C4_1r4iB02 (B:540-609)
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Clan
:
no clan defined [family: zf-C4]
(14)
Family
:
zf-C4
(14)
Rattus norvegicus (Rat)
(6)
1a
zf-C4-1r4iB01
B:540-609
1b
zf-C4-1r4iB02
B:540-609
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Asymmetric Unit 1
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Asym.Unit (43 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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