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1QX7
Biol. Unit 1
Info
Asym.Unit (123 KB)
Biol.Unit 1 (49 KB)
Biol.Unit 2 (48 KB)
Biol.Unit 3 (23 KB)
Biol.Unit 4 (66 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APOCAM BOUND TO THE GATING DOMAIN OF SMALL CONDUCTANCE CA2+-ACTIVATED POTASSIUM CHANNEL
Authors
:
M. A. Schumacher, M. Crum, M. C. Miller
Date
:
04 Sep 03 (Deposition) - 31 Aug 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.09
Chains
:
Asym. Unit : A,B,D,I,M,R
Biol. Unit 1: I,R (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: D,M (1x)
Biol. Unit 4: A,B,M (1x)
Keywords
:
Apocalmodulin, Sk Channel, Small Conductance Ca2+ Activated K+ Channel, Cambd, Gating Domain, Ca2+-Activated Gating, Functioanl Bipartism, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Schumacher, M. Crum, M. C. Miller
Crystal Structures Of Apocalmodulin And An Apocalmodulin/Sk Potassium Channel Gating Domain Complex.
Structure V. 12 849 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 18)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
View:
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Label:
No.
Name
Count
Type
Full Name
1
MSE
18
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 48)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (I:7-42,I:43-78,I:80-115,I:116-146,...)
2: EF_HAND_1 (I:20-32,I:56-68,I:93-105,I:129-141...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM3_RAT
8-43
44-79
81-116
117-149
8
-
-
I:7-42
-
R:7-42
-
-
I:43-78
-
R:43-78
-
-
I:80-115
-
R:80-115
-
-
I:116-146
-
R:116-146
CALM1_RAT
8-43
44-79
81-116
117-149
8
-
-
I:7-42
-
R:7-42
-
-
I:43-78
-
R:43-78
-
-
I:80-115
-
R:80-115
-
-
I:116-146
-
R:116-146
CALM2_RAT
8-43
44-79
81-116
117-149
8
-
-
I:7-42
-
R:7-42
-
-
I:43-78
-
R:43-78
-
-
I:80-115
-
R:80-115
-
-
I:116-146
-
R:116-146
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM3_RAT
21-33
57-69
94-106
130-142
8
-
-
I:20-32
-
R:20-32
-
-
I:56-68
-
R:56-68
-
-
I:93-105
-
R:93-105
-
-
I:129-141
-
R:129-141
CALM1_RAT
21-33
57-69
94-106
130-142
8
-
-
I:20-32
-
R:20-32
-
-
I:56-68
-
R:56-68
-
-
I:93-105
-
R:93-105
-
-
I:129-141
-
R:129-141
CALM2_RAT
21-33
57-69
94-106
130-142
8
-
-
I:20-32
-
R:20-32
-
-
I:56-68
-
R:56-68
-
-
I:93-105
-
R:93-105
-
-
I:129-141
-
R:129-141
[
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]
Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 5)
Info
All SCOP Domains
1a: SCOP_d1qx7a_ (A:)
1b: SCOP_d1qx7b_ (B:)
1c: SCOP_d1qx7i_ (I:)
1d: SCOP_d1qx7m_ (M:)
1e: SCOP_d1qx7r_ (R:)
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(
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(15)
1a
d1qx7a_
A:
1b
d1qx7b_
B:
1c
d1qx7i_
I:
1d
d1qx7m_
M:
1e
d1qx7r_
R:
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1qx7M01 (M:5-70)
1b: CATH_1qx7A01 (A:5-80)
1c: CATH_1qx7I01 (I:5-78)
1d: CATH_1qx7R01 (R:5-78)
1e: CATH_1qx7I02 (I:79-146)
1f: CATH_1qx7R02 (R:79-146)
1g: CATH_1qx7A02 (A:81-146)
1h: CATH_1qx7B00 (B:1-146)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Norway rat (Rattus norvegicus)
(37)
1a
1qx7M01
M:5-70
1b
1qx7A01
A:5-80
1c
1qx7I01
I:5-78
1d
1qx7R01
R:5-78
1e
1qx7I02
I:79-146
1f
1qx7R02
R:79-146
1g
1qx7A02
A:81-146
1h
1qx7B00
B:1-146
[
close CATH info
]
Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_CaMBD_1qx7D01 (D:430-440)
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Clans
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)
(
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Families
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)
(
)
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)
(
)
Clan
:
no clan defined [family: CaMBD]
(2)
Family
:
CaMBD
(2)
Rattus norvegicus (Rat)
(2)
1a
CaMBD-1qx7D01
D:430-440
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (123 KB)
Header - Asym.Unit
Biol.Unit 1 (49 KB)
Header - Biol.Unit 1
Biol.Unit 2 (48 KB)
Header - Biol.Unit 2
Biol.Unit 3 (23 KB)
Header - Biol.Unit 3
Biol.Unit 4 (66 KB)
Header - Biol.Unit 4
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