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Asym. Unit
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Asym.Unit (86 KB)
Biol.Unit 1 (82 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE S. CEREVISIAE YDR533C PROTEIN
Authors
:
M. Graille, N. Leulliot, S. Quevillon-Cheruel, H. Van Tilbeurgh
Date
:
29 Aug 03 (Deposition) - 30 Mar 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Alpha/Beta Hydrolase Fold, Catalytic Triad, Heat Shock Protein, Structural Genomics, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Graille, S. Quevillon-Cheruel, N. Leulliot, C. Z. Zhou, I. L. De La Sierra Gallay, L. Jacquamet, J. L. Ferrer, D. Liger, A. Poupon, J. Janin, H. Van Tilbeurgh
Crystal Structure Of The Ydr533C S. Cerevisiae Protein, A Class Ii Member Of The Hsp31 Family
Structure V. 12 839 2004
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: S,S-(2-HYDROXYETHYL)THIOCYSTEINE (CMEa)
1b: S,S-(2-HYDROXYETHYL)THIOCYSTEINE (CMEb)
2a: GLYCEROL (GOLa)
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No.
Name
Count
Type
Full Name
1
CME
2
Mod. Amino Acid
S,S-(2-HYDROXYETHYL)THIOCYSTEINE
2
GOL
1
Ligand/Ion
GLYCEROL
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY B:52 , ALA B:129 , ASN B:130 , LYS B:150 , LYS B:151 , HOH B:620 , HOH B:635 , HOH B:685
BINDING SITE FOR RESIDUE GOL B 501
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(1, 2)
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Exon 1.1 (A:2-237 | B:2-237)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YDR533C
1
YDR533C.1
IV:1502153-1501440
714
HSP31_YEAST
1-237
237
2
A:2-237
B:2-237
236
236
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1qvwa_ (A:)
1b: SCOP_d1qvwb_ (B:)
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)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Class I glutamine amidotransferase-like
(173)
Family
:
DJ-1/PfpI
(54)
Protein domain
:
Hypothetical protein Ydr533Cp
(4)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(4)
1a
d1qvwa_
A:
1b
d1qvwb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1qvwA00 (A:2-237)
1b: CATH_1qvwB00 (B:2-237)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.880, no name defined]
(97)
Baker's yeast (Saccharomyces cerevisiae)
(8)
1a
1qvwA00
A:2-237
1b
1qvwB00
B:2-237
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