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1QOT
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (150 KB)
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(1)
Title
:
LECTIN UEA-II COMPLEXED WITH FUCOSYLLACTOSE AND FUCOSYLGALACTOSE
Authors
:
R. Loris, H. De Greve, M. -H. Dao-Thi, J. Messens, A. Imberty, L. Wyns
Date
:
16 Nov 99 (Deposition) - 23 Nov 99 (Release) - 21 Jul 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Lectin, Carbohydrate Binding, Fucosyllctose, Fucosylgalactose
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Loris, H. De Greve, M. -H. Dao-Thi, J. Messens, A. Imberty, L. Wyns
Structural Basis Of Carbohydrate Recognition By Lectin Ii From Ulex Europaeus, A Protein With A Promiscuous Carbohydrate Binding Site
J. Mol. Biol. V. 301 987 2000
(for further references see the
PDB file header
)
[
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]
Hetero Components
(6, 21)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: ALPHA-L-FUCOSE (FUCa)
2b: ALPHA-L-FUCOSE (FUCb)
2c: ALPHA-L-FUCOSE (FUCc)
2d: ALPHA-L-FUCOSE (FUCd)
3a: BETA-D-GALACTOSE (GALa)
3b: BETA-D-GALACTOSE (GALb)
3c: BETA-D-GALACTOSE (GALc)
3d: BETA-D-GALACTOSE (GALd)
4a: ALPHA-D-GLUCOSE (GLCa)
5a: MANGANESE (II) ION (MNa)
5b: MANGANESE (II) ION (MNb)
5c: MANGANESE (II) ION (MNc)
5d: MANGANESE (II) ION (MNd)
6a: N-ACETYL-D-GLUCOSAMINE (NAGa)
6b: N-ACETYL-D-GLUCOSAMINE (NAGb)
6c: N-ACETYL-D-GLUCOSAMINE (NAGc)
6d: N-ACETYL-D-GLUCOSAMINE (NAGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
FUC
4
Ligand/Ion
ALPHA-L-FUCOSE
3
GAL
4
Ligand/Ion
BETA-D-GALACTOSE
4
GLC
1
Ligand/Ion
ALPHA-D-GLUCOSE
5
MN
4
Ligand/Ion
MANGANESE (II) ION
6
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
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]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:112 , LYS B:203
BINDING SITE FOR RESIDUE NAG A 401
02
AC2
SOFTWARE
SER A:104 , GLY A:106 , TYR A:135 , GAL A:502 , SER B:199 , VAL B:200 , ASP B:201
BINDING SITE FOR RESIDUE FUC A 501
03
AC3
SOFTWARE
VAL A:85 , ASP A:86 , TYR A:135 , GLY A:219 , ASN A:220 , GLU A:223 , FUC A:501
BINDING SITE FOR RESIDUE GAL A 502
04
AC4
SOFTWARE
PRO B:100 , SER B:112 , SER B:114
BINDING SITE FOR RESIDUE NAG B 401
05
AC5
SOFTWARE
SER B:103 , SER B:104 , GLY B:106 , TYR B:135 , TRP B:138 , GAL B:502
BINDING SITE FOR RESIDUE FUC B 501
06
AC6
SOFTWARE
VAL B:85 , ASP B:86 , TYR B:130 , TYR B:135 , ASN B:136 , GLY B:219 , ASN B:220 , GLU B:223 , FUC B:501
BINDING SITE FOR RESIDUE GAL B 502
07
AC7
SOFTWARE
PRO C:100 , SER C:101 , SER C:112
BINDING SITE FOR RESIDUE NAG C 401
08
AC8
SOFTWARE
SER C:104 , GLY C:106 , TYR C:135 , ASN C:136 , TRP C:138 , GAL C:502 , GLC C:503
BINDING SITE FOR RESIDUE FUC C 501
09
AC9
SOFTWARE
VAL C:85 , ASP C:86 , TYR C:130 , TYR C:135 , ASN C:136 , GLY C:219 , ASN C:220 , GLU C:223 , FUC C:501 , GLC C:503
BINDING SITE FOR RESIDUE GAL C 502
10
BC1
SOFTWARE
TYR C:135 , FUC C:501 , GAL C:502
BINDING SITE FOR RESIDUE GLC C 503
11
BC2
SOFTWARE
SER D:112
BINDING SITE FOR RESIDUE NAG D 401
12
BC3
SOFTWARE
SER D:104 , GLY D:106 , TYR D:135 , GAL D:502
BINDING SITE FOR RESIDUE FUC D 501
13
BC4
SOFTWARE
VAL D:85 , ASP D:86 , TYR D:130 , TYR D:135 , GLY D:219 , ASN D:220 , GLU D:223 , FUC D:501
BINDING SITE FOR RESIDUE GAL D 502
14
BC5
SOFTWARE
GLU A:126 , ASP A:128 , ASP A:139 , HIS A:144
BINDING SITE FOR RESIDUE MN A 301
15
BC6
SOFTWARE
ASP A:128 , TYR A:130 , ASN A:136 , ASP A:139
BINDING SITE FOR RESIDUE CA A 302
16
BC7
SOFTWARE
GLU B:126 , ASP B:128 , ASP B:139 , HIS B:144
BINDING SITE FOR RESIDUE MN B 303
17
BC8
SOFTWARE
ASP B:128 , TYR B:130 , ASN B:136 , ASP B:139
BINDING SITE FOR RESIDUE CA B 304
18
BC9
SOFTWARE
GLU C:126 , ASP C:128 , ASP C:139 , HIS C:144
BINDING SITE FOR RESIDUE MN C 305
19
CC1
SOFTWARE
ASP C:128 , TYR C:130 , ASN C:136 , ASP C:139
BINDING SITE FOR RESIDUE CA C 306
20
CC2
SOFTWARE
GLU D:126 , ASP D:128 , ASP D:139 , HIS D:144
BINDING SITE FOR RESIDUE MN D 307
21
CC3
SOFTWARE
ASP D:128 , TYR D:130 , ASN D:136 , ASP D:139
BINDING SITE FOR RESIDUE CA D 308
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1qota_ (A:)
1b: SCOP_d1qotb_ (B:)
1c: SCOP_d1qotc_ (C:)
1d: SCOP_d1qotd_ (D:)
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Protein Domains
(
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(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
Legume lectin
(110)
Furze (Ulex europaeus), UEA-II [TaxId: 3902]
(5)
1a
d1qota_
A:
1b
d1qotb_
B:
1c
d1qotc_
C:
1d
d1qotd_
D:
[
close SCOP info
]
CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1qotA00 (A:3-239)
1b: CATH_1qotB00 (B:3-239)
1c: CATH_1qotC00 (C:3-239)
1d: CATH_1qotD00 (D:3-239)
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Furze (Ulex europaeus)
(7)
1a
1qotA00
A:3-239
1b
1qotB00
B:3-239
1c
1qotC00
C:3-239
1d
1qotD00
D:3-239
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Site
Protein & NOT PROSITE
Chain A
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Chain C
Chain D
Asymmetric Unit 1
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