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1QND
Asym. Unit
Info
Asym.Unit (629 KB)
Biol.Unit 1 (33 KB)
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Models
(20 )
Title
:
STEROL CARRIER PROTEIN-2, NMR, 20 STRUCTURES
Authors
:
F. Lopez-Garcia, T. Szyperski, J. H. Dyer, T. Choinowski, U. Seedorf, H K. Wuthrich
Date
:
14 Oct 99 (Deposition) - 03 Jul 00 (Release) - 24 Aug 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Transfer Protein, Sterol Carrier Protein 2, Protein Structure, Protein Dynamics, Nitroxide Spin Labels, Lipid Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Lopez-Garcia, T. Szyperski, J. H. Dyer, T. Choinowski, U. Seedorf, H. Hauser, K. Wuthrich
Nmr Structure Of The Sterol Carrier Protein-2: Implications For The Biological Role
J. Mol. Biol. V. 295 595 2000
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 4)
Info
All Exons
Exon 1.15a (A:1-22)
Exon 1.16 (A:23-66)
Exon 1.17a (A:66-92)
Exon 1.17m (A:93-123)
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All Exon Boundaries
1: Boundary 1.14a/1.15a
2: Boundary 1.15a/1.16
3: Boundary 1.16/1.17a
4: Boundary 1.17a/1.17m
5: Boundary 1.17m/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000371514
1a
ENSE00002152663
chr1:
53392901-53393137
237
NLTP_HUMAN
1-23
23
0
-
-
1.2a
ENST00000371514
2a
ENSE00001762232
chr1:
53407468-53407525
58
NLTP_HUMAN
24-43
20
0
-
-
1.3
ENST00000371514
3
ENSE00001789899
chr1:
53413681-53413752
72
NLTP_HUMAN
43-67
25
0
-
-
1.4
ENST00000371514
4
ENSE00001710982
chr1:
53416427-53416558
132
NLTP_HUMAN
67-111
45
0
-
-
1.5
ENST00000371514
5
ENSE00001608911
chr1:
53420412-53420476
65
NLTP_HUMAN
111-132
22
0
-
-
1.6
ENST00000371514
6
ENSE00001647299
chr1:
53427175-53427301
127
NLTP_HUMAN
133-175
43
0
-
-
1.8
ENST00000371514
8
ENSE00001736038
chr1:
53440441-53440504
64
NLTP_HUMAN
175-196
22
0
-
-
1.9b
ENST00000371514
9b
ENSE00001699547
chr1:
53442355-53442441
87
NLTP_HUMAN
196-225
30
0
-
-
1.10
ENST00000371514
10
ENSE00001684266
chr1:
53443889-53444039
151
NLTP_HUMAN
225-275
51
0
-
-
1.11b
ENST00000371514
11b
ENSE00001691043
chr1:
53446068-53446215
148
NLTP_HUMAN
276-325
50
0
-
-
1.12b
ENST00000371514
12b
ENSE00002148975
chr1:
53453701-53453808
108
NLTP_HUMAN
325-361
37
0
-
-
1.14a
ENST00000371514
14a
ENSE00001698748
chr1:
53480562-53480715
154
NLTP_HUMAN
361-412
52
0
-
-
1.15a
ENST00000371514
15a
ENSE00002137029
chr1:
53493641-53493743
103
NLTP_HUMAN
412-446
35
1
A:1-22
22
1.16
ENST00000371514
16
ENSE00001775074
chr1:
53504589-53504718
130
NLTP_HUMAN
447-490
44
1
A:23-66
44
1.17a
ENST00000371514
17a
ENSE00001801163
chr1:
53513530-53513609
80
NLTP_HUMAN
490-516
27
1
A:66-92
27
1.17m
ENST00000371514
17m
ENSE00002199588
chr1:
53516281-53517375
1095
NLTP_HUMAN
517-547
31
1
A:93-123
31
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1qnda_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
SCP-like
(24)
Superfamily
:
SCP-like
(24)
Family
:
Sterol carrier protein, SCP
(9)
Protein domain
:
Sterol carrier protein 2 (SCP2)
(3)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1qnda_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1qndA00 (A:1-123)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Nonspecific Lipid-transfer Protein; Chain A
(12)
Homologous Superfamily
:
Nonspecific Lipid-transfer Protein; Chain A
(12)
Human (Homo sapiens)
(3)
1a
1qndA00
A:1-123
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_SCP2_1qndA01 (A:13-115)
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Clan
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SCP2
(6)
Family
:
SCP2
(6)
Homo sapiens (Human)
(1)
1a
SCP2-1qndA01
A:13-115
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Chain A
Asymmetric Unit 1
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Asym.Unit (629 KB)
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Header - Biol.Unit 1
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