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1QKI
Asym. Unit
Info
Asym.Unit (650 KB)
Biol.Unit 1 (324 KB)
Biol.Unit 2 (322 KB)
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(1)
Title
:
X-RAY STRUCTURE OF HUMAN GLUCOSE 6-PHOSPHATE DEHYDROGENASE (VARIANT CANTON R459L) COMPLEXED WITH STRUCTURAL NADP+
Authors
:
S. W. N. Au, S. Gover, V. M. S. Lam, M. J. Adams
Date
:
20 Jul 99 (Deposition) - 16 Mar 00 (Release) - 16 Jun 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Oxidoreductase, Oxidoredutase, (Choh(D)-Nadp), Glucose Metabolism
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. W. N. Au, S. Gover, V. M. S. Lam, M. J. Adams
Human Glucose-6-Phosphate Dehydrogenase: The Crystal Structure Reveals A Structural Nadp+ Molecule And Provides Insights Into Enzyme Deficiency
Structure V. 8 293 2000
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(3, 21)
Info
All Hetero Components
1a: GLYCOLIC ACID (GOAa)
1b: GLYCOLIC ACID (GOAb)
1c: GLYCOLIC ACID (GOAc)
1d: GLYCOLIC ACID (GOAd)
1e: GLYCOLIC ACID (GOAe)
1f: GLYCOLIC ACID (GOAf)
1g: GLYCOLIC ACID (GOAg)
1h: GLYCOLIC ACID (GOAh)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
3d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
3e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
3f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
3g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
3h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOA
8
Ligand/Ion
GLYCOLIC ACID
2
GOL
5
Ligand/Ion
GLYCEROL
3
NAP
8
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:238 , ARG A:357 , LYS A:366 , ARG A:370 , ARG A:393 , TYR A:401 , ASP A:421 , THR A:423 , ARG A:487 , ASP A:493 , MET A:496 , PHE A:501 , TYR A:503 , TRP A:509
BINDING SITE FOR RESIDUE NAP A 800
02
AC2
SOFTWARE
LYS A:47 , HIS A:201 , LYS A:205
BINDING SITE FOR RESIDUE GOA A 900
03
AC3
SOFTWARE
LYS B:238 , ARG B:357 , GLU B:364 , LYS B:366 , ARG B:370 , ARG B:393 , TYR B:401 , LYS B:403 , ASP B:421 , THR B:423 , ARG B:487 , ASP B:493 , TYR B:503 , TRP B:509
BINDING SITE FOR RESIDUE NAP B 800
04
AC4
SOFTWARE
TYR B:202 , LYS B:205
BINDING SITE FOR RESIDUE GOA B 900
05
AC5
SOFTWARE
LYS C:238 , ARG C:357 , GLU C:364 , LYS C:366 , ARG C:370 , ARG C:393 , ALA C:399 , TYR C:401 , LYS C:403 , ASP C:421 , THR C:423 , ARG C:487 , ASP C:493 , MET C:496 , TYR C:503 , TRP C:509
BINDING SITE FOR RESIDUE NAP C 800
06
AC6
SOFTWARE
TYR C:202 , LYS C:205 , ARG C:365
BINDING SITE FOR RESIDUE GOA C 900
07
AC7
SOFTWARE
LYS D:238 , ARG D:357 , GLU D:364 , LYS D:366 , ARG D:370 , ARG D:393 , TYR D:401 , LYS D:403 , ASP D:421 , THR D:423 , ARG D:487 , ASP D:493 , MET D:496 , TYR D:503 , TRP D:509
BINDING SITE FOR RESIDUE NAP D 800
08
AC8
SOFTWARE
LYS D:47 , HIS D:201 , TYR D:202 , LYS D:205
BINDING SITE FOR RESIDUE GOA D 900
09
AC9
SOFTWARE
LYS E:238 , ARG E:357 , GLU E:364 , LYS E:366 , ARG E:370 , ARG E:393 , TYR E:401 , LYS E:403 , ASP E:421 , THR E:423 , ARG E:487 , ASP E:493 , MET E:496 , TYR E:503 , TYR E:507 , TRP E:509
BINDING SITE FOR RESIDUE NAP E 800
10
BC1
SOFTWARE
HIS E:201 , TYR E:202 , ARG E:365 , HOH E:2011
BINDING SITE FOR RESIDUE GOA E 900
11
BC2
SOFTWARE
LYS F:238 , ARG F:357 , LYS F:366 , ARG F:370 , ARG F:393 , TYR F:401 , LYS F:403 , ASP F:421 , THR F:423 , ARG F:487 , ASP F:493 , PHE F:501 , TYR F:503 , TYR F:507 , TRP F:509
BINDING SITE FOR RESIDUE NAP F 800
12
BC3
SOFTWARE
LYS F:47 , HIS F:201 , LYS F:205
BINDING SITE FOR RESIDUE GOA F 900
13
BC4
SOFTWARE
LYS G:238 , ARG G:357 , LYS G:366 , ARG G:370 , ARG G:393 , TYR G:401 , LYS G:403 , ASP G:421 , THR G:423 , ARG G:487 , ASP G:493 , MET G:496 , TYR G:503 , TRP G:509
BINDING SITE FOR RESIDUE NAP G 800
14
BC5
SOFTWARE
HIS G:201 , ARG G:365
BINDING SITE FOR RESIDUE GOA G 900
15
BC6
SOFTWARE
LYS H:238 , ARG H:357 , GLU H:364 , LYS H:366 , ARG H:370 , ARG H:393 , TYR H:401 , LYS H:403 , ASP H:421 , THR H:423 , ARG H:487 , TYR H:503 , TYR H:507 , TRP H:509 , HOH H:2008
BINDING SITE FOR RESIDUE NAP H 800
16
BC7
SOFTWARE
HIS H:201 , LYS H:205 , GLN H:395 , ASP H:435
BINDING SITE FOR RESIDUE GOA H 900
17
BC8
SOFTWARE
ASP B:375 , ARG D:227
BINDING SITE FOR RESIDUE GOL B1101
18
BC9
SOFTWARE
ARG B:227 , ASP B:350 , HIS D:374 , ASP D:375
BINDING SITE FOR RESIDUE GOL B1102
19
CC1
SOFTWARE
ASP A:375 , ARG C:227
BINDING SITE FOR RESIDUE GOL C1103
20
CC2
SOFTWARE
ARG G:227
BINDING SITE FOR RESIDUE GOL G1104
21
CC3
SOFTWARE
ARG E:227 , ASP G:375 , VAL G:376 , ALA G:377
BINDING SITE FOR RESIDUE GOL E1105
[
close Site info
]
SAPs(SNPs)/Variants
(65, 520)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_002450 (V12L, chain A/B/C/D/E/F/G/H, )
02: VAR_002451 (H32R, chain A/B/C/D/E/F/G/H, )
03: VAR_002453 (A44G, chain A/B/C/D/E/F/G/H, )
04: VAR_002454 (I48T, chain A/B/C/D/E/F/G/H, )
05: VAR_002455 (D58N, chain A/B/C/D/E/F/G/H, )
06: VAR_002456 (V68M, chain A/B/C/D/E/F/G/H, )
07: VAR_002457 (Y70H, chain A/B/C/D/E/F/G/H, )
08: VAR_002458 (L75P, chain A/B/C/D/E/F/G/H, )
09: VAR_002460 (R81C, chain A/B/C/D/E/F/G/H, )
10: VAR_002459 (R81H, chain A/B/C/D/E/F/G/H, )
11: VAR_002461 (S106C, chain A/B/C/D/E/F/G/H, )
12: VAR_002462 (N126D, chain A/B/C/D/E/F/G/H, )
13: VAR_002463 (L128P, chain A/B/C/D/E/F/G/H, )
14: VAR_002464 (G131V, chain A/B/C/D/E/F/G/H, )
15: VAR_002465 (E156K, chain A/B/C/D/E/F/G/H, )
16: VAR_002467 (G163D, chain A/B/C/D/E/F/G/H, )
17: VAR_002466 (G163S, chain A/B/C/D/E/F/G/H, )
18: VAR_002468 (N165D, chain A/B/C/D/E/F/G/H, )
19: VAR_002469 (R166H, chain A/B/C/D/E/F/G/H, )
20: VAR_002470 (D176G, chain A/B/C/D/E/F/G/H, )
21: VAR_002471 (D181V, chain A/B/C/D/E/F/G/H, )
22: VAR_002472 (R182W, chain A/B/C/D/E/F/G/H, )
23: VAR_002473 (S188F, chain A/B/C/D/E/F/G/H, )
24: VAR_002474 (R198C, chain A/B/C/D/E/F/G/H, )
25: VAR_002475 (R198P, chain A/B/C/D/E/F/G/H, )
26: VAR_002476 (M212V, chain A/B/C/D/E/F/G/H, )
27: VAR_002477 (V213L, chain A/B/C/D/E/F/G/H, )
28: VAR_002478 (F216L, chain A/B/C/D/E/F/G/H, )
29: VAR_002480 (R227L, chain A/B/C/D/E/F/G/H, )
30: VAR_002479 (R227Q, chain A/B/C/D/E/F/G/H, )
31: VAR_002482 (R257G, chain A/B/C/D/E/F/G/H, )
32: VAR_002483 (E274K, chain A/B/C/D/E/F/G/H, )
33: VAR_002484 (S278F, chain A/B/C/D/E/F/G/H, )
34: VAR_002485 (T279S, chain A/B/C/D/E/F/G/H, )
35: VAR_002486 (D282H, chain A/B/C/D/E/F/G/H, )
36: VAR_002487 (R285H, chain A/B/C/D/E/F/G/H, )
37: VAR_002488 (V291M, chain A/B/C/D/E/F/G/H, )
38: VAR_002489 (E317K, chain A/B/C/D/E/F/G/H, )
39: VAR_020535 (Y322H, chain A/B/C/D/E/F/G/H, )
40: VAR_002490 (L323P, chain A/B/C/D/E/F/G/H, )
41: VAR_002491 (A335T, chain A/B/C/D/E/F/G/H, )
42: VAR_002492 (L342F, chain A/B/C/D/E/F/G/H, )
43: VAR_002493 (P353S, chain A/B/C/D/E/F/G/H, )
44: VAR_002494 (N363K, chain A/B/C/D/E/F/G/H, )
45: VAR_002495 (C385R, chain A/B/C/D/E/F/G/H, )
46: VAR_002496 (K386E, chain A/B/C/D/E/F/G/H, )
47: VAR_002498 (R387C, chain A/B/C/D/E/F/G/H, )
48: VAR_002497 (R387H, chain A/B/C/D/E/F/G/H, )
49: VAR_002499 (R393H, chain A/B/C/D/E/F/G/H, )
50: VAR_002500 (V394L, chain A/B/C/D/E/F/G/H, )
51: VAR_002501 (P396L, chain A/B/C/D/E/F/G/H, )
52: VAR_002502 (E398K, chain A/B/C/D/E/F/G/H, )
53: VAR_002503 (G410C, chain A/B/C/D/E/F/G/H, )
54: VAR_002504 (G410D, chain A/B/C/D/E/F/G/H, )
55: VAR_002505 (E416K, chain A/B/C/D/E/F/G/H, )
56: VAR_002506 (R439P, chain A/B/C/D/E/F/G/H, )
57: VAR_002507 (L440F, chain A/B/C/D/E/F/G/H, )
58: VAR_002508 (G447R, chain A/B/C/D/E/F/G/H, )
59: VAR_002509 (Q449H, chain A/B/C/D/E/F/G/H, )
60: VAR_002510 (R454C, chain A/B/C/D/E/F/G/H, )
61: VAR_002511 (R454H, chain A/B/C/D/E/F/G/H, )
62: VAR_002512 (L459L, chain A/B/C/D/E/F/G/H, )
63: VAR_002513 (L459P, chain A/B/C/D/E/F/G/H, )
64: VAR_002514 (R463H, chain A/B/C/D/E/F/G/H, )
65: VAR_002515 (G488V, chain A/B/C/D/E/F/G/H, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_002450
V
12
L
G6PD_HUMAN
Unclassified
---
A/B/C/D/E/F/G/H
V
12
L
02
UniProt
VAR_002451
H
32
R
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
H
32
R
03
UniProt
VAR_002453
A
44
G
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
A
44
G
04
UniProt
VAR_002454
I
48
T
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
I
48
T
05
UniProt
VAR_002455
D
58
N
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
D
58
N
06
UniProt
VAR_002456
V
68
M
G6PD_HUMAN
Disease (NSHA)
1050828
A/B/C/D/E/F/G/H
V
68
M
07
UniProt
VAR_002457
Y
70
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
Y
70
H
08
UniProt
VAR_002458
L
75
P
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
L
75
P
09
UniProt
VAR_002460
R
81
C
G6PD_HUMAN
Disease (NSHA)
138687036
A/B/C/D/E/F/G/H
R
81
C
10
UniProt
VAR_002459
R
81
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
81
H
11
UniProt
VAR_002461
S
106
C
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
S
106
C
12
UniProt
VAR_002462
N
126
D
G6PD_HUMAN
Disease (NSHA)
1050829
A/B/C/D/E/F/G/H
N
126
D
13
UniProt
VAR_002463
L
128
P
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
L
128
P
14
UniProt
VAR_002464
G
131
V
G6PD_HUMAN
Polymorphism
137852341
A/B/C/D/E/F/G/H
G
131
V
15
UniProt
VAR_002465
E
156
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
E
156
K
16
UniProt
VAR_002467
G
163
D
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
163
D
17
UniProt
VAR_002466
G
163
S
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
163
S
18
UniProt
VAR_002468
N
165
D
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
N
165
D
19
UniProt
VAR_002469
R
166
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
166
H
20
UniProt
VAR_002470
D
176
G
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
D
176
G
21
UniProt
VAR_002471
D
181
V
G6PD_HUMAN
Disease (NSHA)
5030872
A/B/C/D/E/F/G/H
D
181
V
22
UniProt
VAR_002472
R
182
W
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
182
W
23
UniProt
VAR_002473
S
188
F
G6PD_HUMAN
Disease (NSHA)
5030868
A/B/C/D/E/F/G/H
S
188
F
24
UniProt
VAR_002474
R
198
C
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
198
C
25
UniProt
VAR_002475
R
198
P
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
198
P
26
UniProt
VAR_002476
M
212
V
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
M
212
V
27
UniProt
VAR_002477
V
213
L
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
V
213
L
28
UniProt
VAR_002478
F
216
L
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
F
216
L
29
UniProt
VAR_002480
R
227
L
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
227
L
30
UniProt
VAR_002479
R
227
Q
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
227
Q
31
UniProt
VAR_002482
R
257
G
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
257
G
32
UniProt
VAR_002483
E
274
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
E
274
K
33
UniProt
VAR_002484
S
278
F
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
S
278
F
34
UniProt
VAR_002485
T
279
S
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
T
279
S
35
UniProt
VAR_002486
D
282
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
D
282
H
36
UniProt
VAR_002487
R
285
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
285
H
37
UniProt
VAR_002488
V
291
M
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
V
291
M
38
UniProt
VAR_002489
E
317
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
E
317
K
39
UniProt
VAR_020535
Y
322
H
G6PD_HUMAN
Unclassified
---
A/B/C/D/E/F/G/H
Y
322
H
40
UniProt
VAR_002490
L
323
P
G6PD_HUMAN
Disease (NSHA)
76723693
A/B/C/D/E/F/G/H
L
323
P
41
UniProt
VAR_002491
A
335
T
G6PD_HUMAN
Disease (NSHA)
5030869
A/B/C/D/E/F/G/H
A
335
T
42
UniProt
VAR_002492
L
342
F
G6PD_HUMAN
Unclassified
---
A/B/C/D/E/F/G/H
L
342
F
43
UniProt
VAR_002493
P
353
S
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
P
353
S
44
UniProt
VAR_002494
N
363
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
N
363
K
45
UniProt
VAR_002495
C
385
R
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
C
385
R
46
UniProt
VAR_002496
K
386
E
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
K
386
E
47
UniProt
VAR_002498
R
387
C
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
387
C
48
UniProt
VAR_002497
R
387
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
387
H
49
UniProt
VAR_002499
R
393
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
393
H
50
UniProt
VAR_002500
V
394
L
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
V
394
L
51
UniProt
VAR_002501
P
396
L
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
P
396
L
52
UniProt
VAR_002502
E
398
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
E
398
K
53
UniProt
VAR_002503
G
410
C
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
410
C
54
UniProt
VAR_002504
G
410
D
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
410
D
55
UniProt
VAR_002505
E
416
K
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
E
416
K
56
UniProt
VAR_002506
R
439
P
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
439
P
57
UniProt
VAR_002507
L
440
F
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
L
440
F
58
UniProt
VAR_002508
G
447
R
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
447
R
59
UniProt
VAR_002509
Q
449
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
Q
449
H
60
UniProt
VAR_002510
R
454
C
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
454
C
61
UniProt
VAR_002511
R
454
H
G6PD_HUMAN
Unclassified
---
A/B/C/D/E/F/G/H
R
454
H
62
UniProt
VAR_002512
R
459
L
G6PD_HUMAN
Disease (NSHA)
72554665
A/B/C/D/E/F/G/H
L
459
L
63
UniProt
VAR_002513
R
459
P
G6PD_HUMAN
Disease (NSHA)
72554665
A/B/C/D/E/F/G/H
L
459
P
64
UniProt
VAR_002514
R
463
H
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
R
463
H
65
UniProt
VAR_002515
G
488
V
G6PD_HUMAN
Disease (NSHA)
---
A/B/C/D/E/F/G/H
G
488
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: G6P_DEHYDROGENASE (A:200-206,B:200-206,C:200-206,D:20...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G6P_DEHYDROGENASE
PS00069
Glucose-6-phosphate dehydrogenase active site.
G6PD_HUMAN
200-206
8
A:200-206
B:200-206
C:200-206
D:200-206
E:200-206
F:200-206
G:200-206
H:200-206
[
close PROSITE info
]
Exons
(12, 96)
Info
All Exons
Exon 1.3a (A:12-40 (gaps) | B:11-40 (gaps) | ...)
Exon 1.4 (A:41-53 | B:41-53 | C:41-53 | D:41...)
Exon 1.5a (A:53-89 | B:53-89 | C:53-89 | D:53...)
Exon 1.6a (A:90-162 | B:90-162 | C:90-162 | D...)
Exon 1.7b (A:162-215 | B:162-215 | C:162-215 ...)
Exon 1.8c (A:215-257 | B:215-257 | C:215-257 ...)
Exon 1.9b (A:257-288 | B:257-288 | C:257-288 ...)
Exon 1.10c (A:289-351 | B:289-351 | C:289-351 ...)
Exon 1.10e (A:351-429 | B:351-429 | C:351-429 ...)
Exon 1.11 (A:430-455 | B:430-455 | C:430-455 ...)
Exon 1.12b (A:455-486 | B:455-486 | C:455-486 ...)
Exon 1.12d (A:486-511 | B:486-511 | C:486-511 ...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.1a/1.3a
02: Boundary 1.3a/1.4
03: Boundary 1.4/1.5a
04: Boundary 1.5a/1.6a
05: Boundary 1.6a/1.7b
06: Boundary 1.7b/1.8c
07: Boundary 1.8c/1.9b
08: Boundary 1.9b/1.10c
09: Boundary 1.10c/1.10e
10: Boundary 1.10e/1.11
11: Boundary 1.11/1.12b
12: Boundary 1.12b/1.12d
13: Boundary 1.12d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000393564
1a
ENSE00001450454
X:153775787-153775683
105
G6PD_HUMAN
-
0
0
-
-
1.3a
ENST00000393564
3a
ENSE00001629012
X:153774378-153774251
128
G6PD_HUMAN
1-40
40
8
A:12-40 (gaps)
B:11-40 (gaps)
C:11-40 (gaps)
D:10-40 (gaps)
E:10-40 (gaps)
F:8-40 (gaps)
G:10-40 (gaps)
H:10-40 (gaps)
29
30
30
31
31
33
31
31
1.4
ENST00000393564
4
ENSE00001050596
X:153764393-153764356
38
G6PD_HUMAN
41-53
13
8
A:41-53
B:41-53
C:41-53
D:41-53
E:41-53
F:41-53
G:41-53
H:41-53
13
13
13
13
13
13
13
13
1.5a
ENST00000393564
5a
ENSE00001200322
X:153764260-153764152
109
G6PD_HUMAN
53-89
37
8
A:53-89
B:53-89
C:53-89
D:53-89
E:53-89
F:53-89
G:53-89
H:53-89
37
37
37
37
37
37
37
37
1.6a
ENST00000393564
6a
ENSE00001050603
X:153763600-153763383
218
G6PD_HUMAN
90-162
73
8
A:90-162
B:90-162
C:90-162
D:90-162
E:90-162
F:90-162
G:90-162
H:90-162
73
73
73
73
73
73
73
73
1.7b
ENST00000393564
7b
ENSE00001050595
X:153762711-153762553
159
G6PD_HUMAN
162-215
54
8
A:162-215
B:162-215
C:162-215
D:162-215
E:162-215
F:162-215
G:162-215
H:162-215
54
54
54
54
54
54
54
54
1.8c
ENST00000393564
8c
ENSE00001050598
X:153762375-153762250
126
G6PD_HUMAN
215-257
43
8
A:215-257
B:215-257
C:215-257
D:215-257
E:215-257
F:215-257
G:215-257
H:215-257
43
43
43
43
43
43
43
43
1.9b
ENST00000393564
9b
ENSE00001050601
X:153761884-153761791
94
G6PD_HUMAN
257-288
32
8
A:257-288
B:257-288
C:257-288
D:257-288
E:257-288
F:257-288
G:257-288
H:257-288
32
32
32
32
32
32
32
32
1.10c
ENST00000393564
10c
ENSE00001050608
X:153761343-153761157
187
G6PD_HUMAN
289-351
63
8
A:289-351
B:289-351
C:289-351
D:289-351
E:289-351
F:289-351
G:289-351
H:289-351
63
63
63
63
63
63
63
63
1.10e
ENST00000393564
10e
ENSE00001050602
X:153761017-153760782
236
G6PD_HUMAN
351-429
79
8
A:351-429
B:351-429
C:351-429
D:351-429
E:351-429
F:351-429
G:351-429
H:351-429
79
79
79
79
79
79
79
79
1.11
ENST00000393564
11
ENSE00001050597
X:153760677-153760601
77
G6PD_HUMAN
430-455
26
8
A:430-455
B:430-455
C:430-455
D:430-455
E:430-455
F:430-455
G:430-455
H:430-455
26
26
26
26
26
26
26
26
1.12b
ENST00000393564
12b
ENSE00001050600
X:153760495-153760403
93
G6PD_HUMAN
455-486
32
8
A:455-486
B:455-486
C:455-486
D:455-486
E:455-486
F:455-486
G:455-486
H:455-486
32
32
32
32
32
32
32
32
1.12d
ENST00000393564
12d
ENSE00001515849
X:153760305-153760215
91
G6PD_HUMAN
486-515
30
8
A:486-511
B:486-511
C:486-511
D:486-511
E:486-511
F:486-511
G:486-511
H:486-511
26
26
26
26
26
26
26
26
[
close EXON info
]
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d1qkia2 (A:200-434,A:450-511)
1b: SCOP_d1qkib2 (B:200-434,B:450-511)
1c: SCOP_d1qkic2 (C:200-434,C:450-511)
1d: SCOP_d1qkid2 (D:200-434,D:450-511)
1e: SCOP_d1qkie2 (E:200-434,E:450-511)
1f: SCOP_d1qkif2 (F:200-434,F:450-511)
1g: SCOP_d1qkig2 (G:200-434,G:450-511)
1h: SCOP_d1qkih2 (H:200-434,H:450-511)
2a: SCOP_d1qkia1 (A:12-199,A:435-449)
2b: SCOP_d1qkib1 (B:11-199,B:435-449)
2c: SCOP_d1qkic1 (C:11-199,C:435-449)
2d: SCOP_d1qkid1 (D:10-199,D:435-449)
2e: SCOP_d1qkie1 (E:10-199,E:435-449)
2f: SCOP_d1qkif1 (F:8-199,F:435-449)
2g: SCOP_d1qkig1 (G:10-199,G:435-449)
2h: SCOP_d1qkih1 (H:10-199,H:435-449)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FwdE/GAPDH domain-like
(188)
Superfamily
:
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
(179)
Family
:
Glucose 6-phosphate dehydrogenase-like
(25)
Protein domain
:
Glucose 6-phosphate dehydrogenase
(10)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1qkia2
A:200-434,A:450-511
1b
d1qkib2
B:200-434,B:450-511
1c
d1qkic2
C:200-434,C:450-511
1d
d1qkid2
D:200-434,D:450-511
1e
d1qkie2
E:200-434,E:450-511
1f
d1qkif2
F:200-434,F:450-511
1g
d1qkig2
G:200-434,G:450-511
1h
d1qkih2
H:200-434,H:450-511
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
(179)
Protein domain
:
Glucose 6-phosphate dehydrogenase, N-terminal domain
(10)
Human (Homo sapiens) [TaxId: 9606]
(1)
2a
d1qkia1
A:12-199,A:435-449
2b
d1qkib1
B:11-199,B:435-449
2c
d1qkic1
C:11-199,C:435-449
2d
d1qkid1
D:10-199,D:435-449
2e
d1qkie1
E:10-199,E:435-449
2f
d1qkif1
F:8-199,F:435-449
2g
d1qkig1
G:10-199,G:435-449
2h
d1qkih1
H:10-199,H:435-449
[
close SCOP info
]
CATH Domains
(2, 16)
Info
all CATH domains
1a: CATH_1qkiB02 (B:200-432,B:454-510)
1b: CATH_1qkiC02 (C:200-432,C:454-510)
1c: CATH_1qkiD02 (D:200-432,D:454-510)
1d: CATH_1qkiE02 (E:200-432,E:454-510)
1e: CATH_1qkiF02 (F:200-432,F:454-510)
1f: CATH_1qkiG02 (G:200-432,G:454-510)
1g: CATH_1qkiH02 (H:200-432,H:454-510)
1h: CATH_1qkiA02 (A:200-432,A:454-511)
2a: CATH_1qkiA01 (A:12-199,A:433-453)
2b: CATH_1qkiB01 (B:12-199,B:433-453)
2c: CATH_1qkiC01 (C:12-199,C:433-453)
2d: CATH_1qkiD01 (D:12-199,D:433-453)
2e: CATH_1qkiF01 (F:11-199,F:433-453)
2f: CATH_1qkiG01 (G:11-199,G:433-453)
2g: CATH_1qkiH01 (H:11-199,H:433-453)
2h: CATH_1qkiE01 (E:11-199,E:433-453)
View:
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(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Dihydrodipicolinate Reductase; domain 2
(182)
Homologous Superfamily
:
Dihydrodipicolinate Reductase; domain 2
(178)
Human (Homo sapiens)
(8)
1a
1qkiB02
B:200-432,B:454-510
1b
1qkiC02
C:200-432,C:454-510
1c
1qkiD02
D:200-432,D:454-510
1d
1qkiE02
E:200-432,E:454-510
1e
1qkiF02
F:200-432,F:454-510
1f
1qkiG02
G:200-432,G:454-510
1g
1qkiH02
H:200-432,H:454-510
1h
1qkiA02
A:200-432,A:454-511
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Human (Homo sapiens)
(188)
2a
1qkiA01
A:12-199,A:433-453
2b
1qkiB01
B:12-199,B:433-453
2c
1qkiC01
C:12-199,C:433-453
2d
1qkiD01
D:12-199,D:433-453
2e
1qkiF01
F:11-199,F:433-453
2f
1qkiG01
G:11-199,G:433-453
2g
1qkiH01
H:11-199,H:433-453
2h
1qkiE01
E:11-199,E:433-453
[
close CATH info
]
Pfam Domains
(2, 16)
Info
all PFAM domains
1a: PFAM_G6PD_N_1qkiH01 (H:35-210)
1b: PFAM_G6PD_N_1qkiH02 (H:35-210)
1c: PFAM_G6PD_N_1qkiH03 (H:35-210)
1d: PFAM_G6PD_N_1qkiH04 (H:35-210)
1e: PFAM_G6PD_N_1qkiH05 (H:35-210)
1f: PFAM_G6PD_N_1qkiH06 (H:35-210)
1g: PFAM_G6PD_N_1qkiH07 (H:35-210)
1h: PFAM_G6PD_N_1qkiH08 (H:35-210)
2a: PFAM_G6PD_C_1qkiH09 (H:212-506)
2b: PFAM_G6PD_C_1qkiH10 (H:212-506)
2c: PFAM_G6PD_C_1qkiH11 (H:212-506)
2d: PFAM_G6PD_C_1qkiH12 (H:212-506)
2e: PFAM_G6PD_C_1qkiH13 (H:212-506)
2f: PFAM_G6PD_C_1qkiH14 (H:212-506)
2g: PFAM_G6PD_C_1qkiH15 (H:212-506)
2h: PFAM_G6PD_C_1qkiH16 (H:212-506)
View:
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Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
G6PD_N
(1)
Homo sapiens (Human)
(1)
1a
G6PD_N-1qkiH01
H:35-210
1b
G6PD_N-1qkiH02
H:35-210
1c
G6PD_N-1qkiH03
H:35-210
1d
G6PD_N-1qkiH04
H:35-210
1e
G6PD_N-1qkiH05
H:35-210
1f
G6PD_N-1qkiH06
H:35-210
1g
G6PD_N-1qkiH07
H:35-210
1h
G6PD_N-1qkiH08
H:35-210
Clan
:
no clan defined [family: G6PD_C]
(1)
Family
:
G6PD_C
(1)
Homo sapiens (Human)
(1)
2a
G6PD_C-1qkiH09
H:212-506
2b
G6PD_C-1qkiH10
H:212-506
2c
G6PD_C-1qkiH11
H:212-506
2d
G6PD_C-1qkiH12
H:212-506
2e
G6PD_C-1qkiH13
H:212-506
2f
G6PD_C-1qkiH14
H:212-506
2g
G6PD_C-1qkiH15
H:212-506
2h
G6PD_C-1qkiH16
H:212-506
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