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1QH4
Asym. Unit
Info
Asym.Unit (564 KB)
Biol.Unit 1 (283 KB)
Biol.Unit 2 (280 KB)
Biol.Unit 3 (560 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CHICKEN BRAIN-TYPE CREATINE KINASE AT 1.41 ANGSTROM RESOLUTION
Authors
:
M. Eder, U. Schlattner, A. Becker, T. Wallimann, W. Kabsch, K. Fritz- Wolf
Date
:
11 May 99 (Deposition) - 19 Nov 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.41
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Brain-Type Creatine Kinase, Cancer, Cellular Energy Metabolism, Guanidino Kinase, Neurodegenerative Disorders, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Eder, U. Schlattner, A. Becker, T. Wallimann, W. Kabsch, K. Fritz-Wolf
Crystal Structure Of Brain-Type Creatine Kinase At 1. 41 A Resolution.
Protein Sci. V. 8 2258 1999
(for further references see the
PDB file header
)
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Hetero Components
(2, 7)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
2a: CALCIUM ION (CAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
6
Ligand/Ion
ACETATE ION
2
CA
1
Ligand/Ion
CALCIUM ION
[
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS D:41 , ASP D:44
BINDING SITE FOR RESIDUE CA D 382
2
AC2
SOFTWARE
SER B:15 , VAL B:16 , ARG B:43 , HOH B:1850
BINDING SITE FOR RESIDUE ACT B 1501
3
AC3
SOFTWARE
THR A:71 , VAL A:72 , LEU A:201 , HOH A:1662 , HOH A:1692 , HOH A:1834
BINDING SITE FOR RESIDUE ACT A 1502
4
AC4
SOFTWARE
THR B:71 , VAL B:72 , LEU B:201 , HOH B:1574 , HOH B:1706 , HOH B:1833
BINDING SITE FOR RESIDUE ACT B 1503
5
AC5
SOFTWARE
THR C:71 , VAL C:72 , LEU C:201 , HOH C:1638 , HOH C:1728 , HOH C:1788
BINDING SITE FOR RESIDUE ACT C 1504
6
AC6
SOFTWARE
ASN C:222 , THR C:224 , GLN C:241 , LYS C:242 , HOH C:1653
BINDING SITE FOR RESIDUE ACT C 1505
7
AC7
SOFTWARE
THR D:71 , VAL D:72 , LEU D:201 , HOH D:1552 , HOH D:1604 , HOH D:1616
BINDING SITE FOR RESIDUE ACT D 1506
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 12)
Info
All PROSITE Patterns/Profiles
1: PHOSPHAGEN_KINASE_N (A:11-98,B:11-98,C:11-98,D:11-98)
2: PHOSPHAGEN_KINASE_C (A:125-367,B:125-367,C:125-367,D:12...)
3: PHOSPHAGEN_KINASE (A:283-289,B:283-289,C:283-289,D:28...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PHOSPHAGEN_KINASE_N
PS51509
Phosphagen kinase N-terminal domain profile.
KCRB_CHICK
11-98
4
A:11-98
B:11-98
C:11-98
D:11-98
2
PHOSPHAGEN_KINASE_C
PS51510
Phosphagen kinase C-terminal domain profile.
KCRB_CHICK
125-367
4
A:125-367
B:125-367
C:125-367
D:125-367
3
PHOSPHAGEN_KINASE
PS00112
Phosphagen kinase active site signature.
KCRB_CHICK
283-289
4
A:283-289
B:283-289
C:283-289
D:283-289
[
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Exons
(8, 32)
Info
All Exons
Exon 1.2a (A:2-65 | B:2-65 | C:2-65 | D:2-65)
Exon 1.3 (A:65-116 | B:65-116 | C:65-116 | D...)
Exon 1.4 (A:117-118 | B:117-118 | C:117-118 ...)
Exon 1.5b (A:118-162 | B:118-162 | C:118-162 ...)
Exon 1.6 (A:162-219 | B:162-219 | C:162-219 ...)
Exon 1.7 (A:219-260 | B:219-260 | C:219-260 ...)
Exon 1.8 (A:261-324 | B:261-324 | C:261-324 ...)
Exon 1.9 (A:324-381 | B:324-381 | C:324-381 ...)
View:
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All Exon Boundaries
1: Boundary -/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5b
5: Boundary 1.5b/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/1.8
8: Boundary 1.8/1.9
9: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENSGALT00000018765
2a
ENSGALE00000244592
chr5:
52840304-52840085
220
KCRB_CHICK
1-65
65
4
A:2-65
B:2-65
C:2-65
D:2-65
64
64
64
64
1.3
ENSGALT00000018765
3
ENSGALE00000209561
chr5:
52839031-52838877
155
KCRB_CHICK
65-116
52
4
A:65-116
B:65-116
C:65-116
D:65-116
52
52
52
52
1.4
ENSGALT00000018765
4
ENSGALE00000244590
chr5:
52838588-52838585
4
KCRB_CHICK
117-118
2
4
A:117-118
B:117-118
C:117-118
D:117-118
2
2
2
2
1.5b
ENSGALT00000018765
5b
ENSGALE00000124667
chr5:
52838015-52837884
132
KCRB_CHICK
118-162
45
4
A:118-162
B:118-162
C:118-162
D:118-162
45
45
45
45
1.6
ENSGALT00000018765
6
ENSGALE00000124658
chr5:
52837033-52836862
172
KCRB_CHICK
162-219
58
4
A:162-219
B:162-219
C:162-219
D:162-219
58
58
58
58
1.7
ENSGALT00000018765
7
ENSGALE00000124666
chr5:
52835364-52835241
124
KCRB_CHICK
219-260
42
4
A:219-260
B:219-260
C:219-260
D:219-260
42
42
42
42
1.8
ENSGALT00000018765
8
ENSGALE00000124665
chr5:
52834502-52834313
190
KCRB_CHICK
261-324
64
4
A:261-324
B:261-324
C:261-324
D:261-324
64
64
64
64
1.9
ENSGALT00000018765
9
ENSGALE00000124659
chr5:
52833737-52833368
370
KCRB_CHICK
324-382
59
4
A:324-381
B:324-381
C:324-381
D:324-381
58
58
58
58
[
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]
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d1qh4a1 (A:2-102)
1b: SCOP_d1qh4b1 (B:2-102)
1c: SCOP_d1qh4c1 (C:2-102)
1d: SCOP_d1qh4d1 (D:2-102)
2a: SCOP_d1qh4a2 (A:103-381)
2b: SCOP_d1qh4b2 (B:103-381)
2c: SCOP_d1qh4c2 (C:103-381)
2d: SCOP_d1qh4d2 (D:103-381)
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)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Guanido kinase N-terminal domain
(35)
Superfamily
:
Guanido kinase N-terminal domain
(35)
Family
:
Guanido kinase N-terminal domain
(21)
Protein domain
:
Creatine kinase, N-domain
(8)
Chicken (Gallus gallus), brain-type [TaxId: 9031]
(1)
1a
d1qh4a1
A:2-102
1b
d1qh4b1
B:2-102
1c
d1qh4c1
C:2-102
1d
d1qh4d1
D:2-102
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Glutamine synthetase/guanido kinase
(68)
Superfamily
:
Glutamine synthetase/guanido kinase
(68)
Family
:
Guanido kinase catalytic domain
(29)
Protein domain
:
Creatine kinase, C-terminal domain
(8)
Chicken (Gallus gallus), brain-type [TaxId: 9031]
(1)
2a
d1qh4a2
A:103-381
2b
d1qh4b2
B:103-381
2c
d1qh4c2
C:103-381
2d
d1qh4d2
D:103-381
[
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]
CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_1qh4A02 (A:105-381)
1b: CATH_1qh4B02 (B:105-381)
1c: CATH_1qh4C02 (C:105-381)
1d: CATH_1qh4D02 (D:105-381)
2a: CATH_1qh4A01 (A:6-102)
2b: CATH_1qh4B01 (B:6-102)
2c: CATH_1qh4C01 (C:6-102)
2d: CATH_1qh4D01 (D:6-102)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Creatine Kinase; Chain A, domain 2
(27)
Homologous Superfamily
:
Creatine Kinase; Chain
(27)
Chicken (Gallus gallus)
(2)
1a
1qh4A02
A:105-381
1b
1qh4B02
B:105-381
1c
1qh4C02
C:105-381
1d
1qh4D02
D:105-381
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase Creatine Kinase; Chain A, domain 1
(26)
Homologous Superfamily
:
Transferase Creatine Kinase, Chain A, domain 1
(26)
Chicken (Gallus gallus)
(2)
2a
1qh4A01
A:6-102
2b
1qh4B01
B:6-102
2c
1qh4C01
C:6-102
2d
1qh4D01
D:6-102
[
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_ATP_gua_Ptrans_1qh4D01 (D:120-367)
1b: PFAM_ATP_gua_Ptrans_1qh4D02 (D:120-367)
1c: PFAM_ATP_gua_Ptrans_1qh4D03 (D:120-367)
1d: PFAM_ATP_gua_Ptrans_1qh4D04 (D:120-367)
2a: PFAM_ATP_gua_PtransN_1qh4D05 (D:21-100)
2b: PFAM_ATP_gua_PtransN_1qh4D06 (D:21-100)
2c: PFAM_ATP_gua_PtransN_1qh4D07 (D:21-100)
2d: PFAM_ATP_gua_PtransN_1qh4D08 (D:21-100)
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Clans
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(
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(
)
Organisms
(
)
(
)
Clan
:
GCS
(23)
Family
:
ATP-gua_Ptrans
(14)
Gallus gallus (Chicken)
(1)
1a
ATP-gua_Ptrans-1qh4D01
D:120-367
1b
ATP-gua_Ptrans-1qh4D02
D:120-367
1c
ATP-gua_Ptrans-1qh4D03
D:120-367
1d
ATP-gua_Ptrans-1qh4D04
D:120-367
Clan
:
no clan defined [family: ATP-gua_PtransN]
(14)
Family
:
ATP-gua_PtransN
(14)
Gallus gallus (Chicken)
(1)
2a
ATP-gua_PtransN-1qh4D05
D:21-100
2b
ATP-gua_PtransN-1qh4D06
D:21-100
2c
ATP-gua_PtransN-1qh4D07
D:21-100
2d
ATP-gua_PtransN-1qh4D08
D:21-100
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