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1QA9
Asym. Unit
Info
Asym.Unit (71 KB)
Biol.Unit 1 (35 KB)
Biol.Unit 2 (34 KB)
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(1)
Title
:
STRUCTURE OF A HETEROPHILIC ADHESION COMPLEX BETWEEN THE HUMAN CD2 AND CD58(LFA-3) COUNTER-RECEPTORS
Authors
:
J. -H. Wang, A. Smolyar, K. Tan, J. -H. Liu, M. Kim, Z. J. Sun, G. Wagner, E. L. Reinherz
Date
:
13 Apr 99 (Deposition) - 29 Apr 99 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Cell Adhesion, Ig-Like Domain, Cd2, Cd58, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. H. Wang, A. Smolyar, K. Tan, J. H. Liu, M. Kim, Z. Y. Sun, G. Wagner, E. L. Reinherz
Structure Of A Heterophilic Adhesion Complex Between The Human Cd2 And Cd58 (Lfa-3) Counterreceptors.
Cell(Cambridge, Mass. ) V. 97 791 1999
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
Sorry, no Info available
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Exons
(4, 8)
Info
All Exons
Exon 1.2a (A:4-104 | C:4-104)
Exon 1.3 (A:104-105 | C:104-105)
Exon 2.2a (B:1-94 | D:1-94)
Exon 2.3 (B:94-95 | D:94-95)
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All Exon Boundaries
1: Boundary 1.1a/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 2.1a/2.2a
5: Boundary 2.2a/2.3
6: Boundary 2.3/2.4a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000369478
1a
ENSE00001450130
chr1:
117297007-117297175
169
CD2_HUMAN
1-21
21
0
-
-
1.2a
ENST00000369478
2a
ENSE00000785006
chr1:
117297253-117297573
321
CD2_HUMAN
21-128
108
2
A:4-104
C:4-104
101
101
1.3
ENST00000369478
3
ENSE00000785007
chr1:
117303024-117303254
231
CD2_HUMAN
128-205
78
2
A:104-105
C:104-105
2
2
1.4
ENST00000369478
4
ENSE00000785008
chr1:
117307106-117307228
123
CD2_HUMAN
205-246
42
0
-
-
1.5
ENST00000369478
5
ENSE00001141790
chr1:
117311086-117311850
765
CD2_HUMAN
246-351
106
0
-
-
2.1a
ENST00000369489
1a
ENSE00000957936
chr1:
117113661-117113525
137
LFA3_HUMAN
1-24
24
0
-
-
2.2a
ENST00000369489
2a
ENSE00001158370
chr1:
117087226-117086933
294
LFA3_HUMAN
24-122
99
2
B:1-94
D:1-94
94
94
2.3
ENST00000369489
3
ENSE00000957938
chr1:
117078850-117078587
264
LFA3_HUMAN
122-210
89
2
B:94-95
D:94-95
2
2
2.4a
ENST00000369489
4a
ENSE00000913430
chr1:
117064605-117064528
78
LFA3_HUMAN
210-236
27
0
-
-
2.5b
ENST00000369489
5b
ENSE00002192029
chr1:
117061889-117061853
37
LFA3_HUMAN
236-248
13
0
-
-
2.6b
ENST00000369489
6b
ENSE00001728169
chr1:
117057444-117057157
288
LFA3_HUMAN
248-250
3
0
-
-
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1qa9a_ (A:)
1b: SCOP_d1qa9c_ (C:)
2a: SCOP_d1qa9b_ (B:)
2b: SCOP_d1qa9d_ (D:)
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
CD2, first domain
(9)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1qa9a_
A:
1b
d1qa9c_
C:
Protein domain
:
CD2-binding domain of CD58, N-terminal domain
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
2a
d1qa9b_
B:
2b
d1qa9d_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1qa9B00 (B:1-95)
1b: CATH_1qa9D00 (D:1-95)
1c: CATH_1qa9A00 (A:4-105)
1d: CATH_1qa9C00 (C:4-105)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Human (Homo sapiens)
(912)
1a
1qa9B00
B:1-95
1b
1qa9D00
D:1-95
1c
1qa9A00
A:4-105
1d
1qa9C00
C:4-105
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_V_set_1qa9C01 (C:4-105)
1b: PFAM_V_set_1qa9C02 (C:4-105)
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Clan
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Ig
(577)
Family
:
V-set
(144)
Homo sapiens (Human)
(61)
1a
V-set-1qa9C01
C:4-105
1b
V-set-1qa9C02
C:4-105
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (71 KB)
Header - Asym.Unit
Biol.Unit 1 (35 KB)
Header - Biol.Unit 1
Biol.Unit 2 (34 KB)
Header - Biol.Unit 2
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