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1Q9D
Biol. Unit 1
Info
Asym.Unit (117 KB)
Biol.Unit 1 (112 KB)
Biol.Unit 2 (219 KB)
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(1)
Title
:
FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH A NEW ALLOSTERIC SITE INHIBITOR (I-STATE)
Authors
:
R. B. Honzatko, J. Y. Choe
Date
:
25 Aug 03 (Deposition) - 02 Dec 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Bisphosphatase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Y. Choe, S. W. Nelson, K. L. Arienti, F. U. Axe, T. L. Collins, T. K. Jones, R. D. Kimmich, M. J. Newman, K. Norvell, W. C. Ripka, S. J. Romano, K. M. Short, D. H. Slee, H. J. Fromm, R. B. Honzatko
Inhibition Of Fructose-1, 6-Bisphosphatase By A New Class Of Allosteric Effectors
J. Biol. Chem. V. 278 51176 2003
(for further references see the
PDB file header
)
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: FRUCTOSE-6-PHOSPHATE (F6Pa)
1b: FRUCTOSE-6-PHOSPHATE (F6Pb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
3a: 3-(4-HYDROXYBENZYL)-2-[1-({[2-(4-H... (OI1a)
3b: 3-(4-HYDROXYBENZYL)-2-[1-({[2-(4-H... (OI1b)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
4c: PHOSPHATE ION (PO4c)
4d: PHOSPHATE ION (PO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
F6P
2
Ligand/Ion
FRUCTOSE-6-PHOSPHATE
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
OI1
2
Ligand/Ion
3-(4-HYDROXYBENZYL)-2-[1-({[2-(4-HYDROXYPHENYL)ETHYL]AMINO}CARBONYL)BUTYL]-4-OXO-3,6,11,11A-TETRAHYDRO-4H-PYRAZINO[1,2-B]ISOQUINOLIN-2-IUM-1-OLATE
4
PO4
4
Ligand/Ion
PHOSPHATE ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:121 , ASN A:212 , TYR A:215 , TYR A:244 , GLY A:246 , MET A:248 , TYR A:264 , LYS A:274 , GLU A:280 , PO4 A:403 , HOH A:558 , HOH A:572 , HOH A:587 , HOH A:632 , ARG B:243
BINDING SITE FOR RESIDUE F6P A 401
02
AC2
SOFTWARE
ARG A:243 , ASP B:121 , GLY B:122 , ASN B:212 , TYR B:215 , TYR B:244 , GLY B:246 , SER B:247 , MET B:248 , TYR B:264 , LYS B:274 , GLU B:280 , PO4 B:413 , MG B:414 , HOH B:590 , HOH B:597 , HOH B:665
BINDING SITE FOR RESIDUE F6P B 411
03
AC3
SOFTWARE
ASP A:118 , ASP A:121 , GLU A:280 , PO4 A:403
BINDING SITE FOR RESIDUE MG A 404
04
AC4
SOFTWARE
GLU A:97 , GLU A:98 , ASP A:118 , LEU A:120 , PO4 A:403
BINDING SITE FOR RESIDUE MG A 405
05
AC5
SOFTWARE
GLU B:97 , ASP B:118 , ASP B:121 , GLU B:280 , F6P B:411 , PO4 B:413
BINDING SITE FOR RESIDUE MG B 414
06
AC6
SOFTWARE
GLU B:97 , GLU B:98 , ASP B:118 , LEU B:120 , PO4 B:413 , HOH B:752
BINDING SITE FOR RESIDUE MG B 415
07
AC7
SOFTWARE
GLY A:26 , THR A:27 , GLY A:28 , GLU A:29 , MET A:30 , LYS A:112 , TYR A:113
BINDING SITE FOR RESIDUE PO4 A 402
08
AC8
SOFTWARE
GLU A:97 , ASP A:118 , LEU A:120 , ASP A:121 , GLY A:122 , SER A:123 , GLU A:280 , F6P A:401 , MG A:404 , MG A:405 , HOH A:587
BINDING SITE FOR RESIDUE PO4 A 403
09
AC9
SOFTWARE
GLY B:26 , THR B:27 , GLY B:28 , GLU B:29 , MET B:30 , LYS B:112 , TYR B:113 , HOH B:559
BINDING SITE FOR RESIDUE PO4 B 412
10
BC1
SOFTWARE
GLU B:97 , ASP B:118 , LEU B:120 , ASP B:121 , GLY B:122 , SER B:123 , GLU B:280 , F6P B:411 , MG B:414 , MG B:415
BINDING SITE FOR RESIDUE PO4 B 413
11
BC2
SOFTWARE
GLY A:52 , HIS A:55 , ALA B:43 , THR B:46 , ALA B:47 , LYS B:50 , ALA B:51 , GLY B:52 , ILE B:53 , LEU B:56 , LYS B:71 , LEU B:76 , ASP B:187 , ALA B:189 , ILE B:190
BINDING SITE FOR RESIDUE OI1 B 406
12
BC3
SOFTWARE
ALA A:43 , ALA A:47 , LYS A:50 , ALA A:51 , GLY A:52 , ILE A:53 , LEU A:56 , VAL A:70 , LYS A:71 , LEU A:73 , LEU A:76 , ASP A:187 , ALA A:189 , ILE A:190 , HOH A:772 , GLY B:52 , HIS B:55
BINDING SITE FOR RESIDUE OI1 A 416
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: FBPASE (A:273-285,B:273-285)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FBPASE
PS00124
Fructose-1-6-bisphosphatase active site.
F16P1_PIG
274-286
2
A:273-285
B:273-285
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1q9da_ (A:)
1b: SCOP_d1q9db_ (B:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Carbohydrate phosphatase
(140)
Superfamily
:
Carbohydrate phosphatase
(140)
Family
:
Inositol monophosphatase/fructose-1,6-bisphosphatase-like
(121)
Protein domain
:
Fructose-1,6-bisphosphatase
(75)
Pig (Sus scrofa) [TaxId: 9823]
(65)
1a
d1q9da_
A:
1b
d1q9db_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1q9dA01 (A:9-199)
1b: CATH_1q9dB01 (B:9-199)
2a: CATH_1q9dA02 (A:200-334)
2b: CATH_1q9dB02 (B:200-334)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Fructose-1,6-Bisphosphatase; Chain A, domain 1
(114)
Homologous Superfamily
:
Fructose-1,6-Bisphosphatase, subunit A, domain 1
(114)
Pig (Sus scrofa)
(54)
1a
1q9dA01
A:9-199
1b
1q9dB01
B:9-199
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
D-Maltodextrin-Binding Protein; domain 2
(600)
Homologous Superfamily
:
[code=3.40.190.80, no name defined]
(109)
Pig (Sus scrofa)
(54)
2a
1q9dA02
A:200-334
2b
1q9dB02
B:200-334
[
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_FBPase_1q9dB01 (B:11-334)
1b: PFAM_FBPase_1q9dB02 (B:11-334)
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)
(
)
Clan
:
Phospoesterase
(42)
Family
:
FBPase
(32)
Sus scrofa (Pig)
(19)
1a
FBPase-1q9dB01
B:11-334
1b
FBPase-1q9dB02
B:11-334
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Asymmetric Unit 1
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Asym.Unit (117 KB)
Header - Asym.Unit
Biol.Unit 1 (112 KB)
Header - Biol.Unit 1
Biol.Unit 2 (219 KB)
Header - Biol.Unit 2
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