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1Q5Q
Asym. Unit
Info
Asym.Unit (481 KB)
Biol.Unit 1 (474 KB)
Biol.Unit 2 (939 KB)
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(1)
Title
:
THE RHODOCOCCUS 20S PROTEASOME
Authors
:
Y. D. Kwon, I. Nagy, P. D. Adams, W. Baumeister, B. K. Jap
Date
:
08 Aug 03 (Deposition) - 16 Dec 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N (1x)
Biol. Unit 2: A,B,C,D,E,F,G,H,I,J,K,L,M,N (2x)
Keywords
:
Proteasome Assembly, Pro-Peptide, Inter-Subunit Contacts, Rhodococcus Erythropolis, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. D. Kwon, I. Nagy, P. D. Adams, W. Baumeister, B. K. Jap
Crystal Structures Of The Rhodococcus Proteasome With And Without Its Pro-Peptides: Implications For The Role Of The Pro-Peptide In Proteasome Assembly.
J. Mol. Biol. V. 335 233 2004
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 7)
Info
All PROSITE Patterns/Profiles
1: PROTEASOME_ALPHA_2 (A:16-232,B:16-232,C:16-232,D:16-23...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA1_RHOER
16-232
7
A:16-232
B:16-232
C:16-232
D:16-232
E:16-232
F:16-232
G:16-232
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 14)
Info
All SCOP Domains
1a: SCOP_d1q5qa_ (A:)
1b: SCOP_d1q5qb_ (B:)
1c: SCOP_d1q5qc_ (C:)
1d: SCOP_d1q5qd_ (D:)
1e: SCOP_d1q5qe_ (E:)
1f: SCOP_d1q5qf_ (F:)
1g: SCOP_d1q5qg_ (G:)
2a: SCOP_d1q5qh_ (H:)
2b: SCOP_d1q5qi_ (I:)
2c: SCOP_d1q5qj_ (J:)
2d: SCOP_d1q5qk_ (K:)
2e: SCOP_d1q5ql_ (L:)
2f: SCOP_d1q5qm_ (M:)
2g: SCOP_d1q5qn_ (N:)
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Folds
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Proteasome subunits
(222)
Protein domain
:
Proteasome alpha subunit (non-catalytic)
(66)
Rhodococcus erythropolis [TaxId: 1833]
(3)
1a
d1q5qa_
A:
1b
d1q5qb_
B:
1c
d1q5qc_
C:
1d
d1q5qd_
D:
1e
d1q5qe_
E:
1f
d1q5qf_
F:
1g
d1q5qg_
G:
Protein domain
:
Proteasome beta subunit (catalytic)
(61)
Rhodococcus erythropolis [TaxId: 1833]
(3)
2a
d1q5qh_
H:
2b
d1q5qi_
I:
2c
d1q5qj_
J:
2d
d1q5qk_
K:
2e
d1q5ql_
L:
2f
d1q5qm_
M:
2g
d1q5qn_
N:
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CATH Domains
(1, 14)
Info
all CATH domains
1a: CATH_1q5qA00 (A:9-235)
1b: CATH_1q5qB00 (B:9-235)
1c: CATH_1q5qH00 (H:1-224)
1d: CATH_1q5qI00 (I:1-224)
1e: CATH_1q5qJ00 (J:1-224)
1f: CATH_1q5qK00 (K:1-224)
1g: CATH_1q5qL00 (L:1-224)
1h: CATH_1q5qM00 (M:1-224)
1i: CATH_1q5qC00 (C:9-235)
1j: CATH_1q5qN00 (N:1-224)
1k: CATH_1q5qD00 (D:9-235)
1l: CATH_1q5qE00 (E:9-235)
1m: CATH_1q5qF00 (F:9-235)
1n: CATH_1q5qG00 (G:9-235)
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(128)
Homologous Superfamily
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(124)
Rhodococcus erythropolis. Organism_taxid: 1833. Strain: bl21.
(2)
1a
1q5qA00
A:9-235
1b
1q5qB00
B:9-235
1c
1q5qH00
H:1-224
1d
1q5qI00
I:1-224
1e
1q5qJ00
J:1-224
1f
1q5qK00
K:1-224
1g
1q5qL00
L:1-224
1h
1q5qM00
M:1-224
1i
1q5qC00
C:9-235
1j
1q5qN00
N:1-224
1k
1q5qD00
D:9-235
1l
1q5qE00
E:9-235
1m
1q5qF00
F:9-235
1n
1q5qG00
G:9-235
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Pfam Domains
(1, 14)
Info
all PFAM domains
1a: PFAM_Proteasome_1q5qG01 (G:24-209)
1b: PFAM_Proteasome_1q5qG02 (G:24-209)
1c: PFAM_Proteasome_1q5qG03 (G:24-209)
1d: PFAM_Proteasome_1q5qG04 (G:24-209)
1e: PFAM_Proteasome_1q5qG05 (G:24-209)
1f: PFAM_Proteasome_1q5qG06 (G:24-209)
1g: PFAM_Proteasome_1q5qG07 (G:24-209)
1h: PFAM_Proteasome_1q5qN01 (N:1-185)
1i: PFAM_Proteasome_1q5qN02 (N:1-185)
1j: PFAM_Proteasome_1q5qN03 (N:1-185)
1k: PFAM_Proteasome_1q5qN04 (N:1-185)
1l: PFAM_Proteasome_1q5qN05 (N:1-185)
1m: PFAM_Proteasome_1q5qN06 (N:1-185)
1n: PFAM_Proteasome_1q5qN07 (N:1-185)
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)
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)
Clan
:
NTN
(93)
Family
:
Proteasome
(36)
Rhodococcus erythropolis (Arthrobacter picolinophilus)
(2)
1a
Proteasome-1q5qG01
G:24-209
1b
Proteasome-1q5qG02
G:24-209
1c
Proteasome-1q5qG03
G:24-209
1d
Proteasome-1q5qG04
G:24-209
1e
Proteasome-1q5qG05
G:24-209
1f
Proteasome-1q5qG06
G:24-209
1g
Proteasome-1q5qG07
G:24-209
1h
Proteasome-1q5qN01
N:1-185
1i
Proteasome-1q5qN02
N:1-185
1j
Proteasome-1q5qN03
N:1-185
1k
Proteasome-1q5qN04
N:1-185
1l
Proteasome-1q5qN05
N:1-185
1m
Proteasome-1q5qN06
N:1-185
1n
Proteasome-1q5qN07
N:1-185
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Asymmetric Unit 1
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Asym.Unit (481 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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