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Theoretical Model (168 KB)
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Title
:
THEORETICAL MODEL OF THE DIISOPROPYLPHOSPHORYL-ACETYLCHOLINESTERASE COMPLEXED WITH 1,3-PROPYLENE-BIS-N,N'-SYN-4-PYRIDINIUMALDOXIME
Authors
:
Y. -P. Pang
Date
:
25 Jun 03 (Deposition) - 22 Jul 03 (Release) - 22 Jul 03 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,_
#
(
#
: chains that contain no standard or modified protein/DNA/RNA residue)
Keywords
:
Serine Esterase, Human-Acetylcholinesterase, Hydrolase, Bis-
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. -P. Pang, T. M. Kollmeyer, F. Hong, J. -C. Lee, P. I. Hammond, S. P. Haugabouk, S. Brimijoin
Rational Design Of Alkylene-Linked Bis-Pyridiniumaldoximes As Improved Acetylcholinesteras Reactivators
Chem. Biol. V. 10 491 2003
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: DIISOPROPYL PHOSPHONATE (DFPa)
2a: 1,3-PROPYLENE-BIS-N,N'-SYN-4-PYRID... (PSPa)
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Label:
No.
Name
Count
Type
Full Name
1
DFP
1
Ligand/Ion
DIISOPROPYL PHOSPHONATE
2
PSP
1
Ligand/Ion
1,3-PROPYLENE-BIS-N,N'-SYN-4-PYRIDINIUMALDOXIME
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021326 (P99A, chain A, )
2: VAR_011934 (V297E, chain A, )
3: VAR_002359 (H317N, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021326
P
135
A
ACES_HUMAN
Polymorphism
17885778
A
P
99
A
2
UniProt
VAR_011934
V
333
E
ACES_HUMAN
Polymorphism
8286
A
V
297
E
3
UniProt
VAR_002359
H
353
N
ACES_HUMAN
Polymorphism
1799805
A
H
317
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: CARBOXYLESTERASE_B_2 (A:89-99)
2: CARBOXYLESTERASE_B_1 (A:185-200)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBOXYLESTERASE_B_2
PS00941
Carboxylesterases type-B signature 2.
ACES_HUMAN
125-135
1
A:89-99
2
CARBOXYLESTERASE_B_1
PS00122
Carboxylesterases type-B serine active site.
ACES_HUMAN
221-236
1
A:185-200
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Exons
(3, 3)
Info
All Exons
Exon 1.5e (A:1-320)
Exon 1.6c (A:321-482)
Exon 1.7a (A:482-538)
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All Exon Boundaries
1: Boundary 1.4b/1.5e
2: Boundary 1.5e/1.6c
3: Boundary 1.6c/1.7a
4: Boundary 1.7a/1.9h
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4b
ENST00000241069
4b
ENSE00001873556
chr7:
100493509-100493423
87
ACES_HUMAN
-
0
0
-
-
1.5e
ENST00000241069
5e
ENSE00001741634
chr7:
100491873-100490786
1088
ACES_HUMAN
1-356
356
1
A:1-320
320
1.6c
ENST00000241069
6c
ENSE00001609117
chr7:
100490439-100489955
485
ACES_HUMAN
357-518
162
1
A:321-482
162
1.7a
ENST00000241069
7a
ENSE00001762084
chr7:
100488959-100488790
170
ACES_HUMAN
518-575
58
1
A:482-538
57
1.9h
ENST00000241069
9h
ENSE00001639836
chr7:
100487956-100487615
342
ACES_HUMAN
575-614
40
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Chain A
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