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1PN2
Asym. Unit
Info
Asym.Unit (195 KB)
Biol.Unit 1 (94 KB)
Biol.Unit 2 (98 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE SELENOMETHIONINE LABELLED 2-ENOYL-COA HYDRATASE 2 DOMAIN OF CANDIDA TROPICALIS MULTIFUNCTIONAL ENZYME TYPE 2
Authors
:
M. K. Koski, A. M. Haapalainen, J. K. Hiltunen, T. Glumoff
Date
:
12 Jun 03 (Deposition) - 13 Apr 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Hot-Dog Fold, Hydratase 2 Motif, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
M. K. Koski, A. M. Haapalainen, J. K. Hiltunen, T. Glumoff
A Two-Domain Structure Of One Subunit Explains Unique Features Of Eukaryotic Hydratase 2.
J. Biol. Chem. V. 279 24666 2004
(for further references see the
PDB file header
)
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
2
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS C:46 , THR C:49 , HIS C:73 , HIS C:76 , TYR C:131 , EDO C:803 , HOH C:869 , HOH C:917
BINDING SITE FOR RESIDUE EDO C 801
2
AC2
SOFTWARE
GLN C:255 , ASN C:267 , HOH C:852 , ASP D:35 , SER D:36 , HOH D:829 , HOH D:912
BINDING SITE FOR RESIDUE EDO D 802
3
AC3
SOFTWARE
ILE C:48 , HIS C:111 , SER C:113 , ASN C:127 , EDO C:801 , HOH C:869
BINDING SITE FOR RESIDUE EDO C 803
4
AC4
SOFTWARE
ALA A:160 , ARG D:241 , HIS D:257
BINDING SITE FOR RESIDUE EDO D 804
5
AC5
SOFTWARE
ASP A:172 , HOH A:823 , ILE B:19 , ALA B:23
BINDING SITE FOR RESIDUE EDO A 805
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1pn2a1 (A:4-151)
1b: SCOP_d1pn2a2 (A:152-275)
1c: SCOP_d1pn2b1 (B:5-151)
1d: SCOP_d1pn2b2 (B:152-274)
1e: SCOP_d1pn2c1 (C:5-151)
1f: SCOP_d1pn2c2 (C:152-275)
1g: SCOP_d1pn2d1 (D:5-151)
1h: SCOP_d1pn2d2 (D:152-276)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Superfamily
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Family
:
MaoC-like
(9)
Protein domain
:
2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase
(3)
Yeast (Candida tropicalis) [TaxId: 5482]
(2)
1a
d1pn2a1
A:4-151
1b
d1pn2a2
A:152-275
1c
d1pn2b1
B:5-151
1d
d1pn2b2
B:152-274
1e
d1pn2c1
C:5-151
1f
d1pn2c2
C:152-275
1g
d1pn2d1
D:5-151
1h
d1pn2d2
D:152-276
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1pn2C01 (C:5-152)
1b: CATH_1pn2B01 (B:5-152)
1c: CATH_1pn2C02 (C:153-275)
1d: CATH_1pn2B02 (B:153-274)
1e: CATH_1pn2D01 (D:5-152)
1f: CATH_1pn2A01 (A:4-152)
1g: CATH_1pn2D02 (D:153-276)
1h: CATH_1pn2A02 (A:153-275)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Thiol Ester Dehydrase; Chain A
(90)
Homologous Superfamily
:
[code=3.10.129.10, no name defined]
(90)
Candida tropicalis. Organism_taxid: 5482.
(2)
1a
1pn2C01
C:5-152
1b
1pn2B01
B:5-152
1c
1pn2C02
C:153-275
1d
1pn2B02
B:153-274
1e
1pn2D01
D:5-152
1f
1pn2A01
A:4-152
1g
1pn2D02
D:153-276
1h
1pn2A02
A:153-275
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (195 KB)
Header - Asym.Unit
Biol.Unit 1 (94 KB)
Header - Biol.Unit 1
Biol.Unit 2 (98 KB)
Header - Biol.Unit 2
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