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1PFJ
Asym. Unit
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Asym.Unit (563 KB)
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Models
(19 )
Title
:
SOLUTION STRUCTURE OF THE N-TERMINAL PH/PTB DOMAIN OF THE TFIIH P62 SUBUNIT
Authors
:
V. Gervais, V. Lamour, A. Jawhari, F. Frindel, E. Wasielewski, J. C. Thierry, B. Kieffer, A. Poterszman, Structural Proteomics In Europe (Spine)
Date
:
27 May 03 (Deposition) - 08 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (19 x)
Keywords
:
Ph/Ptb Domain, Structural Proteomics In Europe, Spine, Structural Genomics, Transcription
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
V. Gervais, V. Lamour, A. Jawhari, F. Frindel, E. Wasielewski, S. Dubaele, J. M. Egly, J. C. Thierry, B. Kieffer, A. Poterszman
Tfiih Contains A Ph Domain Involved In Dna Nucleotide Excision Repair.
Nat. Struct. Mol. Biol. V. 11 616 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: BSD (A:99-108|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BSD
PS50858
BSD domain profile.
TF2H1_HUMAN
99-154
180-232
1
A:99-108
-
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Exons
(2, 2)
Info
All Exons
Exon 1.4b (A:1-52)
Exon 1.5c (A:52-108)
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All Exon Boundaries
1: Boundary 1.1g/1.4b
2: Boundary 1.4b/1.5c
3: Boundary 1.5c/1.7a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1g
ENST00000265963
1g
ENSE00002143325
chr11:
18344143-18344287
145
TF2H1_HUMAN
-
0
0
-
-
1.4b
ENST00000265963
4b
ENSE00002171519
chr11:
18354607-18354775
169
TF2H1_HUMAN
1-52
52
1
A:1-52
52
1.5c
ENST00000265963
5c
ENSE00000886580
chr11:
18357301-18357493
193
TF2H1_HUMAN
52-116
65
1
A:52-108
57
1.7a
ENST00000265963
7a
ENSE00000886581
chr11:
18359656-18359821
166
TF2H1_HUMAN
116-171
56
0
-
-
1.8
ENST00000265963
8
ENSE00001597724
chr11:
18361111-18361204
94
TF2H1_HUMAN
172-203
32
0
-
-
1.9
ENST00000265963
9
ENSE00001742103
chr11:
18362808-18362957
150
TF2H1_HUMAN
203-253
51
0
-
-
1.10
ENST00000265963
10
ENSE00001748719
chr11:
18363075-18363154
80
TF2H1_HUMAN
253-279
27
0
-
-
1.11b
ENST00000265963
11b
ENSE00001692627
chr11:
18369135-18369262
128
TF2H1_HUMAN
280-322
43
0
-
-
1.12a
ENST00000265963
12a
ENSE00001662355
chr11:
18369379-18369466
88
TF2H1_HUMAN
322-351
30
0
-
-
1.13b
ENST00000265963
13b
ENSE00001609933
chr11:
18373428-18373516
89
TF2H1_HUMAN
352-381
30
0
-
-
1.14c
ENST00000265963
14c
ENSE00001683216
chr11:
18373876-18373993
118
TF2H1_HUMAN
381-420
40
0
-
-
1.15b
ENST00000265963
15b
ENSE00001765402
chr11:
18379499-18379589
91
TF2H1_HUMAN
421-451
31
0
-
-
1.16a
ENST00000265963
16a
ENSE00001676092
chr11:
18380072-18380187
116
TF2H1_HUMAN
451-489
39
0
-
-
1.17
ENST00000265963
17
ENSE00001763947
chr11:
18382162-18382254
93
TF2H1_HUMAN
490-520
31
0
-
-
1.18d
ENST00000265963
18d
ENSE00001106704
chr11:
18387330-18388577
1248
TF2H1_HUMAN
521-548
28
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1pfja_ (A:)
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
TFIIH domain
(9)
Protein domain
:
TFIIH basal transcription factor complex p62 subunit (BTF2-p62), N-terminal domain
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1pfja_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1pfjA00 (A:1-108)
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Class
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Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
PH-domain like
(150)
Homologous Superfamily
:
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
(147)
Human (Homo sapiens)
(85)
1a
1pfjA00
A:1-108
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Pfam Domains
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Chain A
Asymmetric Unit 1
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