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1PAL
Asym. Unit
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Asym.Unit (23 KB)
Biol.Unit 1 (19 KB)
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(1)
Title
:
IONIC INTERACTIONS WITH PARVALBUMINS. CRYSTAL STRUCTURE DETERMINATION OF PIKE 4.10 PARVALBUMIN IN FOUR DIFFERENT IONIC ENVIRONMENTS
Authors
:
J. P. Declercq, B. Tinant, J. Parello, J. Rambaud
Date
:
08 Nov 90 (Deposition) - 15 Jan 92 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Calcium Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. P. Declercq, B. Tinant, J. Parello, J. Rambaud
Ionic Interactions With Parvalbumins. Crystal Structure Determination Of Pike 4. 10 Parvalbumin In Four Different Ionic Environments.
J. Mol. Biol. V. 220 1017 1991
(for further references see the
PDB file header
)
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
3a: AMMONIUM ION (NH4a)
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No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
CA
2
Ligand/Ion
CALCIUM ION
3
NH4
1
Ligand/Ion
AMMONIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: CD (AUTHOR)
5: EF (AUTHOR)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:90 , ASP A:92 , ASP A:94 , MET A:96 , GLU A:101 , HOH A:246
BINDING SITE FOR RESIDUE CA A 110
2
AC2
SOFTWARE
ASP A:51 , ASP A:53 , SER A:55 , PHE A:57 , GLU A:59 , GLU A:62
BINDING SITE FOR RESIDUE CA A 111
3
AC3
SOFTWARE
ASP A:53 , GLU A:59 , ASP A:61
BINDING SITE FOR RESIDUE NH4 A 223
4
CD
AUTHOR
ASP A:51 , GLN A:52 , ASP A:53 , LYS A:54 , SER A:55 , GLY A:56 , PHE A:57 , ILE A:58 , GLU A:59 , GLU A:60 , ASP A:61 , GLU A:62
RESIDUES FORMING THE SITE OCCUPIED BY CA 111
5
EF
AUTHOR
ASP A:90 , LYS A:91 , ASP A:92 , GLY A:93 , ASP A:94 , GLY A:95 , MET A:96 , ILE A:97 , GLY A:98 , VAL A:99 , ASP A:100 , GLU A:101
RESIDUES FORMING THE SITE OCCUPIED BY CA 110
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:38-73|A:77-108)
2: EF_HAND_1 (A:51-63|A:90-102)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
PRVB_ESOLU
37-72
76-107
2
A:38-73
A:77-108
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
PRVB_ESOLU
50-62
89-101
2
A:51-63
A:90-102
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1pala_ (A:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Parvalbumin
(36)
Protein domain
:
Parvalbumin
(30)
Pike (Esox lucius) [TaxId: 8010]
(9)
1a
d1pala_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1palA00 (A:1-108)
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Organisms
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Northern pike (Esox lucius)
(9)
1a
1palA00
A:1-108
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_EF_hand_5_1palA01 (A:40-106)
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Clans
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Clan
:
EF_hand
(270)
Family
:
EF_hand_5
(126)
Esox lucius (Northern pike)
(5)
1a
EF_hand_5-1palA01
A:40-106
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Asym.Unit (23 KB)
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