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1P9F
Asym. Unit
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Asym.Unit (45 KB)
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Models
(20 )
Title
:
NMR STRUCTURE OF NEUROKININ B FROM DYANA
Authors
:
A. K. Mantha, I. R. Chandrashekar, N. Z. Baquer, S. M. Cowsik
Date
:
12 May 03 (Deposition) - 10 Aug 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Protein, Structures From Dyana, Neuropeptide
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Mantha, I. R. Chandrashekar, N. Z. Baquer, S. M. Cowsik
Three Dimensional Structure Of Mammalian Tachykinin Peptide Neurokinin B Bound To Lipid Micelles.
J. Biomol. Struct. Dyn. V. 22 137 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_069176 (M10T, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_069176
M
90
T
TKNK_HUMAN
Disease (HH10)
121918123
A
M
10
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: TACHYKININ (A:6-10)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TACHYKININ
PS00267
Tachykinin family signature.
TKNK_HUMAN
86-91
1
A:6-10
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Exons
(1, 1)
Info
All Exons
Exon 1.6 (A:1-10)
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All Exon Boundaries
1: Boundary 1.5a/1.6
2: Boundary 1.6/1.8
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2d
ENST00000300108
2d
ENSE00001516796
chr12:
57410304-57410171
134
TKNK_HUMAN
-
0
0
-
-
1.3
ENST00000300108
3
ENSE00002155346
chr12:
57409586-57409468
119
TKNK_HUMAN
1-38
38
0
-
-
1.4
ENST00000300108
4
ENSE00001420789
chr12:
57407455-57407362
94
TKNK_HUMAN
39-70
32
0
-
-
1.5a
ENST00000300108
5a
ENSE00001107300
chr12:
57407172-57407143
30
TKNK_HUMAN
70-80
11
0
-
-
1.6
ENST00000300108
6
ENSE00001107285
chr12:
57406659-57406606
54
TKNK_HUMAN
80-98
19
1
A:1-10
10
1.8
ENST00000300108
8
ENSE00001775129
chr12:
57406236-57406162
75
TKNK_HUMAN
98-121
24
0
-
-
1.9
ENST00000300108
9
ENSE00001516773
chr12:
57406075-57405918
158
TKNK_HUMAN
-
0
0
-
-
1.10
ENST00000300108
10
ENSE00001516772
chr12:
57404687-57404511
177
TKNK_HUMAN
-
0
0
-
-
1.11a
ENST00000300108
11a
ENSE00001516771
chr12:
57404072-57403794
279
TKNK_HUMAN
-
0
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1p9fa_ (A:)
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Protein Domains
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Organisms
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(
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Class
:
Peptides
(792)
Fold
:
Peptide hormones
(51)
Superfamily
:
Peptide hormones
(51)
Family
:
Peptide hormones
(51)
Protein domain
:
Neurokinin B
(1)
Synthetic
(1)
1a
d1p9fa_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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