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1P97
Asym. Unit
Info
Asym.Unit (678 KB)
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Models
(20 )
Title
:
NMR STRUCTURE OF THE C-TERMINAL PAS DOMAIN OF HIF2A
Authors
:
P. J. Erbel, P. B. Card, O. Karakuzu, R. K. Bruick, K. H. Gardner
Date
:
09 May 03 (Deposition) - 13 Jan 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Mixed Alpha-Beta Fold, Transcription
(Keyword Search:
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Reference
:
P. J. Erbel, P. B. Card, O. Karakuzu, R. K. Bruick, K. H. Gardner
Structural Basis For Pas Domain Heterodimerization In The Basic Helix-Loop-Helix-Pas Transcription Factor Hypoxia-Inducible Factor.
Proc. Natl. Acad. Sci. Usa V. 100 15504 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PAS (-|A:13-64)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PAS
PS50112
PAS repeat profile.
EPAS1_HUMAN
92-147
249-300
1
-
A:13-64
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Exons
(4, 4)
Info
All Exons
Exon 1.10b (A:1-24 (gaps))
Exon 1.11 (A:24-60)
Exon 1.12b (A:60-109)
Exon 1.13 (A:109-114)
View:
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All Exon Boundaries
1: Boundary 1.9/1.10b
2: Boundary 1.10b/1.11
3: Boundary 1.11/1.12b
4: Boundary 1.12b/1.13
5: Boundary 1.13/1.14
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000263734
3a
ENSE00001875413
chr2:
46524541-46525076
536
EPAS1_HUMAN
1-9
9
0
-
-
1.5b
ENST00000263734
5b
ENSE00000809792
chr2:
46574012-46574202
191
EPAS1_HUMAN
9-73
65
0
-
-
1.7c
ENST00000263734
7c
ENSE00000751537
chr2:
46583290-46583441
152
EPAS1_HUMAN
73-123
51
0
-
-
1.8
ENST00000263734
8
ENSE00000751539
chr2:
46583863-46583947
85
EPAS1_HUMAN
124-152
29
0
-
-
1.9
ENST00000263734
9
ENSE00000751542
chr2:
46587777-46587895
119
EPAS1_HUMAN
152-191
40
0
-
-
1.10b
ENST00000263734
10b
ENSE00002181725
chr2:
46588024-46588229
206
EPAS1_HUMAN
192-260
69
1
A:1-24 (gaps)
48
1.11
ENST00000263734
11
ENSE00000751546
chr2:
46596966-46597072
107
EPAS1_HUMAN
260-296
37
1
A:24-60
37
1.12b
ENST00000263734
12b
ENSE00000962618
chr2:
46602829-46602976
148
EPAS1_HUMAN
296-345
50
1
A:60-109
50
1.13
ENST00000263734
13
ENSE00000751550
chr2:
46603678-46603892
215
EPAS1_HUMAN
345-417
73
1
A:109-114
6
1.14
ENST00000263734
14
ENSE00000962619
chr2:
46605033-46605226
194
EPAS1_HUMAN
417-481
65
0
-
-
1.15b
ENST00000263734
15b
ENSE00000962620
chr2:
46605796-46605906
111
EPAS1_HUMAN
482-518
37
0
-
-
1.16b
ENST00000263734
16b
ENSE00000962621
chr2:
46607366-46607856
491
EPAS1_HUMAN
519-682
164
0
-
-
1.17b
ENST00000263734
17b
ENSE00000962622
chr2:
46608735-46608861
127
EPAS1_HUMAN
682-724
43
0
-
-
1.18
ENST00000263734
18
ENSE00000751568
chr2:
46609114-46609228
115
EPAS1_HUMAN
725-763
39
0
-
-
1.19b
ENST00000263734
19b
ENSE00000751570
chr2:
46609564-46609737
174
EPAS1_HUMAN
763-821
59
0
-
-
1.20c
ENST00000263734
20c
ENSE00001816384
chr2:
46611648-46613836
2189
EPAS1_HUMAN
821-870
50
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1p97a_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Profilin-like
(304)
Superfamily
:
PYP-like sensor domain (PAS domain)
(163)
Family
:
Hypoxia-inducible factor Hif2a, C-terminal domain
(10)
Protein domain
:
Hypoxia-inducible factor Hif2a, C-terminal domain
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1p97a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1p97A00 (A:1-114)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Beta-Lactamase
(202)
Homologous Superfamily
:
[code=3.30.450.20, no name defined]
(117)
Human (Homo sapiens)
(9)
1a
1p97A00
A:1-114
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PAS_3_1p97A01 (A:18-105)
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Clan
:
PAS_Fold
(84)
Family
:
PAS_3
(4)
Homo sapiens (Human)
(3)
1a
PAS_3-1p97A01
A:18-105
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Chain A
Asymmetric Unit 1
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Asym.Unit (678 KB)
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