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1P6L
Asym. Unit
Info
Asym.Unit (151 KB)
Biol.Unit 1 (144 KB)
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(1)
Title
:
BOVINE ENDOTHELIAL NOS HEME DOMAIN WITH L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE BOUND
Authors
:
M. L. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, J. -M. Hah, J. A. Gomez E. A. Litzinger, R. B. Silverman, T. L. Poulos
Date
:
29 Apr 03 (Deposition) - 13 Jan 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitric Oxide Synthase, Oxidoreductase, Heme-Enzyme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. L. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, J. M. Hah, J. A. Gomez-Vidal, E. A. Litzinger, R. B. Silverman, T. L. Poulos
Structural Basis For Dipeptide Amide Isoform-Selective Inhibition Of Neuronal Nitric Oxide Synthase.
Nat. Struct. Mol. Biol. V. 11 54 2004
(for further references see the
PDB file header
)
[
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Hetero Components
(7, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CACODYLATE ION (CACa)
2b: CACODYLATE ION (CACb)
3a: L-N(OMEGA)-NITROARGININE-2,4-L-DIA... (DP1a)
3b: L-N(OMEGA)-NITROARGININE-2,4-L-DIA... (DP1b)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
5a: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Ba)
5b: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Bb)
6a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
6b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
7a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CAC
2
Ligand/Ion
CACODYLATE ION
3
DP1
2
Ligand/Ion
L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE
4
GOL
2
Ligand/Ion
GLYCEROL
5
H4B
2
Ligand/Ion
5,6,7,8-TETRAHYDROBIOPTERIN
6
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
7
ZN
1
Ligand/Ion
ZINC ION
[
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:324 , CYS A:384 , LYS A:438 , ARG A:440 , GLY A:441
BINDING SITE FOR RESIDUE CAC A 850
02
AC2
SOFTWARE
GLY A:188 , TRP A:358 , SER A:428 , HOH A:1048
BINDING SITE FOR RESIDUE ACT A 860
03
AC3
SOFTWARE
TYR B:83 , TRP B:324 , CYS B:384
BINDING SITE FOR RESIDUE CAC B 851
04
AC4
SOFTWARE
TRP B:358 , VAL B:420
BINDING SITE FOR RESIDUE ACT B 861
05
AC5
SOFTWARE
CYS A:96 , CYS A:101 , CYS B:96 , CYS B:101
BINDING SITE FOR RESIDUE ZN B 900
06
AC6
SOFTWARE
TRP A:180 , ARG A:185 , CYS A:186 , SER A:228 , PHE A:355 , SER A:356 , TRP A:358 , GLU A:363 , TRP A:449 , TYR A:477 , H4B A:760 , DP1 A:790 , HOH A:898 , HOH A:918 , HOH A:1070
BINDING SITE FOR RESIDUE HEM A 500
07
AC7
SOFTWARE
SER A:104 , ARG A:367 , ALA A:448 , TRP A:449 , HEM A:500 , GOL A:880 , HOH A:898 , HOH A:944 , HOH A:946 , HOH A:957 , TRP B:447 , PHE B:462 , HIS B:463 , GLN B:464 , GLU B:465 , HOH B:906
BINDING SITE FOR RESIDUE H4B A 760
08
AC8
SOFTWARE
SER A:248 , GLN A:249 , PRO A:336 , ASN A:340 , SER A:356 , GLY A:357 , TRP A:358 , GLU A:363 , TYR A:477 , HEM A:500 , HOH A:891 , HOH A:918 , HOH A:934 , HOH A:960 , HOH A:992 , HOH A:1056 , HOH A:1068
BINDING SITE FOR RESIDUE DP1 A 790
09
AC9
SOFTWARE
TRP B:180 , ARG B:185 , CYS B:186 , SER B:228 , MET B:341 , PHE B:355 , TRP B:358 , GLU B:363 , TRP B:449 , TYR B:477 , H4B B:761 , DP1 B:791 , HOH B:902 , HOH B:911 , HOH B:912 , HOH B:914 , HOH B:1059
BINDING SITE FOR RESIDUE HEM B 500
10
BC1
SOFTWARE
TRP A:447 , PHE A:462 , SER B:104 , ARG B:367 , ALA B:448 , TRP B:449 , HEM B:500 , GOL B:881 , HOH B:904 , HOH B:911 , HOH B:922 , HOH B:1030 , HOH B:1058
BINDING SITE FOR RESIDUE H4B B 761
11
BC2
SOFTWARE
SER B:248 , GLN B:249 , PRO B:336 , ASN B:340 , SER B:356 , GLY B:357 , TRP B:358 , GLU B:363 , HEM B:500 , GOL B:881 , HOH B:902 , HOH B:934 , HOH B:936 , HOH B:979 , HOH B:1059 , HOH B:1099
BINDING SITE FOR RESIDUE DP1 B 791
12
BC3
SOFTWARE
VAL A:106 , ARG A:367 , HIS A:373 , H4B A:760 , HOH A:1056 , TRP B:76 , HOH B:906
BINDING SITE FOR RESIDUE GOL A 880
13
BC4
SOFTWARE
TRP A:76 , VAL B:106 , ARG B:367 , HIS B:373 , H4B B:761 , DP1 B:791 , HOH B:904
BINDING SITE FOR RESIDUE GOL B 881
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:185-192,B:185-192)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS3_BOVIN
185-192
2
A:185-192
B:185-192
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1p6la_ (A:)
1b: SCOP_d1p6lb_ (B:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Cow (Bos taurus) [TaxId: 9913]
(85)
1a
d1p6la_
A:
1b
d1p6lb_
B:
[
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1p6lA03 (A:314-336,A:359-424)
1b: CATH_1p6lB03 (B:314-336,B:359-424)
2a: CATH_1p6lB01 (B:84-201,B:228-238,B:342-356,B:426-450)
2b: CATH_1p6lA01 (A:84-201,A:228-238,A:342-356,A:426-450)
3a: CATH_1p6lA02 (A:202-227,A:242-313,A:477-481)
3b: CATH_1p6lB02 (B:202-227,B:242-313,B:477-481)
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 3
(105)
Cattle (Bos taurus)
(38)
1a
1p6lA03
A:314-336,A:359-424
1b
1p6lB03
B:314-336,B:359-424
Topology
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Cattle (Bos taurus)
(38)
2a
1p6lB01
B:84-201,B:228-238,B:342-356,B:426-450
2b
1p6lA01
A:84-201,A:228-238,A:342-356,A:426-450
Topology
:
Nitric Oxide Synthase;Heme Domain; Chain A, domain 2
(105)
Homologous Superfamily
:
Nitric Oxide Synthase;Heme Domain;Chain A domain 2
(105)
Cattle (Bos taurus)
(38)
3a
1p6lA02
A:202-227,A:242-313,A:477-481
3b
1p6lB02
B:202-227,B:242-313,B:477-481
[
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]
Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_NO_synthase_1p6lB01 (B:121-482)
1b: PFAM_NO_synthase_1p6lB02 (B:121-482)
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(
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Organisms
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)
(
)
Clan
:
no clan defined [family: NO_synthase]
(140)
Family
:
NO_synthase
(140)
Bos taurus (Bovine)
(28)
1a
NO_synthase-1p6lB01
B:121-482
1b
NO_synthase-1p6lB02
B:121-482
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Asymmetric Unit 1
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