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1P6H
Asym. Unit
Info
Asym.Unit (155 KB)
Biol.Unit 1 (149 KB)
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(1)
Title
:
RAT NEURONAL NOS HEME DOMAIN WITH L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE BOUND
Authors
:
M. L. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, J. -M. Hah, J. A. Gomez-Vidal, E. A. Litzinger, R. B. Silverman, T. L. Poulos
Date
:
29 Apr 03 (Deposition) - 13 Jan 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.98
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Nitric Oxide Synthase, Oxidoreductase, Heme-Enzyme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. L. Flinspach, H. Li, J. Jamal, W. Yang, H. Huang, J. M. Hah, J. A. Gomez-Vidal, E. A. Litzinger, R. B. Silverman, T. L. Poulos
Structural Basis For Dipeptide Amide Isoform-Selective Inhibition Of Neuronal Nitric Oxide Synthase.
Nat. Struct. Mol. Biol. V. 11 54 2004
(for further references see the
PDB file header
)
[
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Hetero Components
(5, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: L-N(OMEGA)-NITROARGININE-2,4-L-DIA... (DP1a)
2b: L-N(OMEGA)-NITROARGININE-2,4-L-DIA... (DP1b)
3a: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Ba)
3b: 5,6,7,8-TETRAHYDROBIOPTERIN (H4Bb)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
5a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
DP1
2
Ligand/Ion
L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE
3
H4B
2
Ligand/Ion
5,6,7,8-TETRAHYDROBIOPTERIN
4
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
ZN
1
Ligand/Ion
ZINC ION
[
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:417 , TRP A:587 , SER A:657 , HEM A:750
BINDING SITE FOR RESIDUE ACT A 860
2
AC2
SOFTWARE
GLN B:420 , TRP B:587 , HOH B:1126 , HOH B:1131
BINDING SITE FOR RESIDUE ACT B 861
3
AC3
SOFTWARE
CYS A:326 , CYS A:331 , CYS B:326 , CYS B:331
BINDING SITE FOR RESIDUE ZN A 900
4
AC4
SOFTWARE
TRP A:409 , CYS A:415 , SER A:457 , PHE A:584 , SER A:585 , GLY A:586 , TRP A:587 , GLU A:592 , TRP A:678 , TYR A:706 , H4B A:760 , DP1 A:790 , ACT A:860 , HOH A:904 , HOH A:905 , HOH A:921 , HOH A:946 , HOH A:1076
BINDING SITE FOR RESIDUE HEM A 750
5
AC5
SOFTWARE
SER A:334 , ARG A:596 , VAL A:677 , TRP A:678 , HEM A:750 , HOH A:902 , HOH A:905 , HOH A:918 , HOH A:926 , HOH A:969 , HOH A:1000 , TRP B:676 , PHE B:691 , HIS B:692 , GLN B:693 , GLU B:694
BINDING SITE FOR RESIDUE H4B A 760
6
AC6
SOFTWARE
SER A:477 , GLN A:478 , ARG A:481 , PRO A:565 , VAL A:567 , SER A:585 , GLY A:586 , TRP A:587 , GLU A:592 , HEM A:750 , HOH A:906 , HOH A:946 , HOH A:965 , HOH A:992 , HOH A:994 , HOH A:1058 , HOH A:1073 , HOH A:1076
BINDING SITE FOR RESIDUE DP1 A 790
7
AC7
SOFTWARE
TRP B:409 , CYS B:415 , PHE B:584 , SER B:585 , TRP B:587 , GLU B:592 , TRP B:678 , TYR B:706 , H4B B:761 , DP1 B:791 , HOH B:867 , HOH B:881 , HOH B:886 , HOH B:898 , HOH B:939 , HOH B:1027
BINDING SITE FOR RESIDUE HEM B 750
8
AC8
SOFTWARE
TRP A:676 , PHE A:691 , HIS A:692 , GLN A:693 , GLU A:694 , SER B:334 , MET B:336 , ARG B:596 , VAL B:677 , TRP B:678 , HEM B:750 , HOH B:863 , HOH B:886 , HOH B:889 , HOH B:918
BINDING SITE FOR RESIDUE H4B B 761
9
AC9
SOFTWARE
SER B:477 , GLN B:478 , ARG B:481 , PRO B:565 , VAL B:567 , SER B:585 , GLY B:586 , TRP B:587 , GLU B:592 , HEM B:750 , HOH B:870 , HOH B:876 , HOH B:898 , HOH B:939 , HOH B:1027 , HOH B:1094 , HOH B:1095 , HOH B:1096
BINDING SITE FOR RESIDUE DP1 B 791
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:414-421,B:414-421)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS1_RAT
414-421
2
A:414-421
B:414-421
[
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1p6ha_ (A:)
1b: SCOP_d1p6hb_ (B:)
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Classes
(
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(
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(154)
1a
d1p6ha_
A:
1b
d1p6hb_
B:
[
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1p6hA03 (A:543-565,A:588-653)
1b: CATH_1p6hB03 (B:543-565,B:588-653)
2a: CATH_1p6hB01 (B:314-430,B:457-467,B:571-585,B:655-679)
2b: CATH_1p6hA01 (A:314-430,A:457-467,A:571-585,A:655-679)
3a: CATH_1p6hA02 (A:431-456,A:471-542,A:706-710)
3b: CATH_1p6hB02 (B:431-456,B:471-542,B:706-710)
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Homologous Superfamilies
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Bovine Endothelial Nitric Oxide Synthase Heme Domain; Chain: A,domain 3
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 3
(105)
Norway rat (Rattus norvegicus)
(25)
1a
1p6hA03
A:543-565,A:588-653
1b
1p6hB03
B:543-565,B:588-653
Topology
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Homologous Superfamily
:
Nitric Oxide Synthase; Chain A, domain 1
(105)
Norway rat (Rattus norvegicus)
(25)
2a
1p6hB01
B:314-430,B:457-467,B:571-585,B:655-679
2b
1p6hA01
A:314-430,A:457-467,A:571-585,A:655-679
Topology
:
Nitric Oxide Synthase;Heme Domain; Chain A, domain 2
(105)
Homologous Superfamily
:
Nitric Oxide Synthase;Heme Domain;Chain A domain 2
(105)
Norway rat (Rattus norvegicus)
(25)
3a
1p6hA02
A:431-456,A:471-542,A:706-710
3b
1p6hB02
B:431-456,B:471-542,B:706-710
[
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (155 KB)
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