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1P44
Asym. Unit
Info
Asym.Unit (260 KB)
Biol.Unit 1 (169 KB)
Biol.Unit 2 (170 KB)
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(1)
Title
:
TARGETING TUBERCULOSIS AND MALARIA THROUGH INHIBITION OF ENOYL REDUCTASE: COMPOUND ACTIVITY AND STRUCTURAL DATA
Authors
:
M. R. Kuo, H. R. Morbidoni, D. Alland, S. F. Sneddon, B. B. Gourlie, M. M. Staveski, M. Leonard, J. S. Gregory, A. D. Janjigian, C. Yee, J. M. Musser, B. Kreiswirth, H. Iwamoto, R. Perozzo, W. R. Jacobs Jr, J. C. Sacchettini, D. A. Fidock, Tb Structural Genomics Consortium (Tbsgc)
Date
:
21 Apr 03 (Deposition) - 16 Sep 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D,E,F (1x)
Keywords
:
Inha, Short Chain Dehydrogenase Reductase, Inhibitor, Rossmann Fold, Enoyl-Acp Reductase, Structural Genomics, Psi, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. R. Kuo, H. R. Morbidoni, D. Alland, S. F. Sneddon, B. B. Gourlie, M. M. Staveski, M. Leonard, J. S. Gregory, A. D. Janjigian, C. Yee, J. M. Musser, B. Kreiswirth, H. Iwamoto, R. Perozzo, W. R. Jacobs, J. C. Sacchettini, D. A. Fidock
Targeting Tuberculosis And Malaria Through Inhibition Of Enoyl Reductase: Compound Activity And Structural Data.
J. Biol. Chem. V. 278 20851 2003
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: 5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1... (GEQa)
1b: 5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1... (GEQb)
1c: 5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1... (GEQc)
1d: 5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1... (GEQd)
2a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
2b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
2c: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADc)
2d: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADd)
2e: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADe)
2f: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GEQ
4
Ligand/Ion
5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1-YL]CARBONYL}-1H-INDOLE
2
NAD
6
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
[
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:14 , ILE A:15 , ILE A:16 , SER A:20 , ILE A:21 , PHE A:41 , LEU A:63 , ASP A:64 , VAL A:65 , SER A:94 , ILE A:95 , GLY A:96 , MET A:147 , ASP A:148 , MET A:161 , LYS A:165 , ALA A:191 , GLY A:192 , PRO A:193 , ILE A:194 , GEQ A:350 , HOH A:755 , HOH A:770 , HOH A:815
BINDING SITE FOR RESIDUE NAD A 300
02
AC2
SOFTWARE
GLY B:14 , ILE B:15 , ILE B:16 , SER B:20 , ILE B:21 , PHE B:41 , LEU B:63 , ASP B:64 , VAL B:65 , SER B:94 , ILE B:95 , GLY B:96 , MET B:147 , ASP B:148 , PHE B:149 , MET B:161 , LYS B:165 , GLY B:192 , PRO B:193 , ILE B:194 , THR B:196 , GEQ B:450 , HOH B:765 , HOH B:767 , HOH B:860
BINDING SITE FOR RESIDUE NAD B 400
03
AC3
SOFTWARE
GLY C:14 , ILE C:16 , SER C:20 , ILE C:21 , PHE C:41 , LEU C:63 , ASP C:64 , VAL C:65 , SER C:94 , ILE C:95 , GLY C:96 , ILE C:122 , MET C:147 , ASP C:148 , PHE C:149 , LYS C:165 , ILE C:194 , THR C:196 , GEQ C:550 , HOH C:760
BINDING SITE FOR RESIDUE NAD C 500
04
AC4
SOFTWARE
GLY D:14 , ILE D:15 , ILE D:16 , SER D:20 , ILE D:21 , PHE D:41 , LEU D:63 , ASP D:64 , VAL D:65 , SER D:94 , ILE D:95 , GLY D:96 , ILE D:122 , MET D:147 , ASP D:148 , PHE D:149 , LYS D:165 , ALA D:191 , GLY D:192 , PRO D:193 , ILE D:194 , GEQ D:650 , HOH D:787 , HOH D:880
BINDING SITE FOR RESIDUE NAD D 600
05
AC5
SOFTWARE
GLY E:14 , ILE E:16 , SER E:20 , ILE E:21 , PHE E:41 , LEU E:63 , ASP E:64 , VAL E:65 , ILE E:95 , GLY E:96 , ILE E:122 , MET E:147 , ASP E:148 , PHE E:149 , TYR E:158 , LYS E:165 , ALA E:191 , GLY E:192 , PRO E:193 , ILE E:194 , THR E:196 , MET E:199 , HOH E:766 , HOH E:812 , HOH E:861
BINDING SITE FOR RESIDUE NAD E 700
06
AC6
SOFTWARE
GLY F:14 , ILE F:16 , SER F:20 , ILE F:21 , PHE F:41 , LEU F:63 , ASP F:64 , VAL F:65 , ILE F:95 , GLY F:96 , ILE F:122 , MET F:147 , ASP F:148 , PHE F:149 , LYS F:165 , ALA F:191 , GLY F:192 , PRO F:193 , ILE F:194 , HOH F:789
BINDING SITE FOR RESIDUE NAD F 750
07
AC7
SOFTWARE
GLY A:96 , PHE A:149 , ALA A:157 , TYR A:158 , MET A:161 , ILE A:215 , LEU A:218 , NAD A:300
BINDING SITE FOR RESIDUE GEQ A 350
08
AC8
SOFTWARE
GLY B:96 , MET B:103 , TYR B:158 , MET B:199 , LEU B:218 , NAD B:400
BINDING SITE FOR RESIDUE GEQ B 450
09
AC9
SOFTWARE
GLY C:96 , MET C:103 , TYR C:158 , MET C:161 , ILE C:202 , LEU C:218 , NAD C:500
BINDING SITE FOR RESIDUE GEQ C 550
10
BC1
SOFTWARE
TYR D:158 , MET D:199 , ILE D:202 , ILE D:215 , LEU D:218 , NAD D:600
BINDING SITE FOR RESIDUE GEQ D 650
[
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SAPs(SNPs)/Variants
(1, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_INHA_MYCTU_001 (S94A, chain A/B/C/D/E/F, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_INHA_MYCTU_001
*
S
94
A
INHA_MYCTU
---
---
A/B/C/D/E/F
S
94
A
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1p44a_ (A:)
1b: SCOP_d1p44b_ (B:)
1c: SCOP_d1p44c_ (C:)
1d: SCOP_d1p44d_ (D:)
1e: SCOP_d1p44e_ (E:)
1f: SCOP_d1p44f_ (F:)
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)
(
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
Enoyl-ACP reductase
(96)
Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
(44)
1a
d1p44a_
A:
1b
d1p44b_
B:
1c
d1p44c_
C:
1d
d1p44d_
D:
1e
d1p44e_
E:
1f
d1p44f_
F:
[
close SCOP info
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1p44A00 (A:2-269)
1b: CATH_1p44B00 (B:2-269)
1c: CATH_1p44C00 (C:2-269)
1d: CATH_1p44D00 (D:2-269)
1e: CATH_1p44E00 (E:2-269)
1f: CATH_1p44F00 (F:2-269)
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Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Mycobacterium tuberculosis. Organism_taxid: 1773.
(22)
1a
1p44A00
A:2-269
1b
1p44B00
B:2-269
1c
1p44C00
C:2-269
1d
1p44D00
D:2-269
1e
1p44E00
E:2-269
1f
1p44F00
F:2-269
[
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_adh_short_C2_1p44F01 (F:14-265)
1b: PFAM_adh_short_C2_1p44F02 (F:14-265)
1c: PFAM_adh_short_C2_1p44F03 (F:14-265)
1d: PFAM_adh_short_C2_1p44F04 (F:14-265)
1e: PFAM_adh_short_C2_1p44F05 (F:14-265)
1f: PFAM_adh_short_C2_1p44F06 (F:14-265)
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)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short_C2
(98)
Mycobacterium tuberculosis
(11)
1a
adh_short_C2-1p44F01
F:14-265
1b
adh_short_C2-1p44F02
F:14-265
1c
adh_short_C2-1p44F03
F:14-265
1d
adh_short_C2-1p44F04
F:14-265
1e
adh_short_C2-1p44F05
F:14-265
1f
adh_short_C2-1p44F06
F:14-265
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