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1P03
Asym. Unit
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Asym.Unit (38 KB)
Biol.Unit 1 (33 KB)
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(1)
Title
:
STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES
Authors
:
R. Bone, D. A. Agard
Date
:
24 Apr 89 (Deposition) - 15 Apr 90 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,P
Biol. Unit 1: A,P (1x)
Keywords
:
Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Bone, D. Frank, C. A. Kettner, D. A. Agard
Structural Analysis Of Specificity: Alpha-Lytic Protease Complexes With Analogues Of Reaction Intermediates.
Biochemistry V. 28 7600 1989
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: VALINE BORONIC ACID (B2Va)
2a: SULFATE ION (SO4a)
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No.
Name
Count
Type
Full Name
1
B2V
1
Mod. Amino Acid
VALINE BORONIC ACID
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:15A , ASN A:15B , ARG A:230 , PRO A:233 , HOH A:271 , HOH A:282 , HOH A:370
BINDING SITE FOR RESIDUE SO4 A 1
2
AC2
SOFTWARE
HIS A:57 , ARG A:125 , TYR A:171 , GLY A:192A , ARG A:192B , GLY A:193 , ASP A:194 , SER A:195 , MET A:213 , SER A:214 , GLY A:215 , GLY A:216 , VAL A:217A , GLY A:244 , HOH P:90 , HOH P:103
BINDING SITE FOR CHAIN P OF METHOXYSUCCINYL-ALA- ALA-PRO-VALINE BORONIC ACID INHIBITOR
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 2)
Info
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1: TRYPSIN_HIS (A:53-58)
2: TRYPSIN_SER (A:191-200)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRYPSIN_HIS
PS00134
Serine proteases, trypsin family, histidine active site.
PRLA_LYSEN
231-236
1
A:53-58
2
TRYPSIN_SER
PS00135
Serine proteases, trypsin family, serine active site.
PRLA_LYSEN
336-347
1
A:191-200
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1p03a_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Trypsin-like serine proteases
(1752)
Superfamily
:
Trypsin-like serine proteases
(1752)
Family
:
Prokaryotic proteases
(131)
Protein domain
:
alpha-Lytic protease
(45)
Lysobacter enzymogenes, 495 [TaxId: 69]
(45)
1a
d1p03a_
A:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1p03A02 (A:116-230)
1b: CATH_1p03A01 (A:16-115,A:231-242)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
Trypsin-like serine proteases
(1488)
Lysobacter enzymogenes. Organism_taxid: 69.
(9)
1a
1p03A02
A:116-230
1b
1p03A01
A:16-115,A:231-242
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Trypsin_1p03A01 (A:16-226)
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(
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Clan
:
Peptidase_PA
(797)
Family
:
Trypsin
(679)
Lysobacter enzymogenes
(16)
1a
Trypsin-1p03A01
A:16-226
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