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1OY7
Biol. Unit 2
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Asym.Unit (98 KB)
Biol.Unit 1 (20 KB)
Biol.Unit 2 (21 KB)
Biol.Unit 3 (21 KB)
Biol.Unit 4 (22 KB)
Biol.Unit 5 (21 KB)
Biol.Unit 6 (39 KB)
Biol.Unit 7 (39 KB)
Biol.Unit 8 (20 KB)
Biol.Unit 9 (3 KB)
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(1)
Title
:
STRUCTURE AND FUNCTION ANALYSIS OF PEPTIDE ANTAGONISTS OF MELANOMA INHIBITOR OF APOPTOSIS (ML-IAP)
Authors
:
M. C. Franklin, S. Kadkhodayan, H. Ackerly, D. Alexandru, M. D. Distefa L. O. Elliott, J. A. Flygare, D. Vucic, K. Deshayes, W. J. Fairbrother
Date
:
03 Apr 03 (Deposition) - 26 Aug 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E,F (1x)
Biol. Unit 6: A,D (1x)
Biol. Unit 7: B,C (1x)
Biol. Unit 8: E (1x)
Biol. Unit 9: F (1x)
Keywords
:
Zinc Binding, Peptide Complex, Apoptosis Inhibition, Apoptosis- Peptide Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. C. Franklin, S. Kadkhodayan, H. Ackerly, D. Alexandru, M. D. Distefano, L. O. Elliott, J. A. Flygare, G. Mausisa, D. C. Okawa, D. Ong, D. Vucic, K. Deshayes, W. J. Fairbrother
Structure And Function Analysis Of Peptide Antagonists Of Melanoma Inhibitor Of Apoptosis (Ml-Iap)
Biochemistry V. 42 8223 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20... (P33a)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC6 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
CYS B:124 , CYS B:127 , HIS B:144 , CYS B:151
BINDING SITE FOR RESIDUE ZN B 1002
2
AC6
SOFTWARE
PHE A:81 , TYR A:128 , PHE B:81 , GLY B:83 , TYR B:128 , TYR C:128 , ALA D:80 , PHE D:81 , PHE D:114 , THR D:116 , TYR D:128 , HOH D:1331 , HOH D:1332 , HOH D:1347 , HOH D:1359 , HOH D:1391 , HOH D:1392
BINDING SITE FOR RESIDUE P33 D 1300
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: BIR_REPEAT_1 (B:87-154)
2: BIR_REPEAT_2 (B:90-155)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BIR_REPEAT_1
PS01282
BIR repeat.
BIRC7_HUMAN
87-154
1
-
B:87-154
-
-
-
2
BIR_REPEAT_2
PS50143
BIR repeat profile.
BIRC7_HUMAN
90-155
1
-
B:90-155
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 5)
Info
All SCOP Domains
1a: SCOP_d1oy7a_ (A:)
1b: SCOP_d1oy7b_ (B:)
1c: SCOP_d1oy7c_ (C:)
1d: SCOP_d1oy7d_ (D:)
1e: SCOP_d1oy7e_ (E:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Inhibitor of apoptosis (IAP) repeat
(71)
Superfamily
:
Inhibitor of apoptosis (IAP) repeat
(71)
Family
:
Inhibitor of apoptosis (IAP) repeat
(70)
Protein domain
:
BIR-containing protein 7 (ML-IAP, livin)
(8)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d1oy7a_
A:
1b
d1oy7b_
B:
1c
d1oy7c_
C:
1d
d1oy7d_
D:
1e
d1oy7e_
E:
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CATH Domains
(1, 5)
Info
all CATH domains
1a: CATH_1oy7B00 (B:71-171)
1b: CATH_1oy7C00 (C:71-171)
1c: CATH_1oy7D00 (D:71-170)
1d: CATH_1oy7A00 (A:71-169)
1e: CATH_1oy7E00 (E:78-171)
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A
(42)
Homologous Superfamily
:
Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A
(42)
Human (Homo sapiens)
(35)
1a
1oy7B00
B:71-171
1b
1oy7C00
C:71-171
1c
1oy7D00
D:71-170
1d
1oy7A00
A:71-169
1e
1oy7E00
E:78-171
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Pfam Domains
(1, 5)
Info
all PFAM domains
1a: PFAM_BIR_1oy7E01 (E:90-155)
1b: PFAM_BIR_1oy7E02 (E:90-155)
1c: PFAM_BIR_1oy7E03 (E:90-155)
1d: PFAM_BIR_1oy7E04 (E:90-155)
1e: PFAM_BIR_1oy7E05 (E:90-155)
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Clan
:
BIR-like
(25)
Family
:
BIR
(25)
Homo sapiens (Human)
(24)
1a
BIR-1oy7E01
E:90-155
1b
BIR-1oy7E02
E:90-155
1c
BIR-1oy7E03
E:90-155
1d
BIR-1oy7E04
E:90-155
1e
BIR-1oy7E05
E:90-155
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Asymmetric Unit 1
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Asym.Unit (98 KB)
Header - Asym.Unit
Biol.Unit 1 (20 KB)
Header - Biol.Unit 1
Biol.Unit 2 (21 KB)
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Biol.Unit 3 (21 KB)
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Biol.Unit 4 (22 KB)
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Biol.Unit 5 (21 KB)
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Biol.Unit 6 (39 KB)
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Biol.Unit 7 (39 KB)
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