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1OW6
Asym. Unit
Info
Asym.Unit (77 KB)
Biol.Unit 1 (93 KB)
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(1)
Title
:
PAXILLIN LD4 MOTIF BOUND TO THE FOCAL ADHESION TARGETING (FAT) DOMAIN OF THE FOCAL ADHESION KINASE
Authors
:
M. K. Hoellerer, M. E. M. Noble, G. Labesse, I. D. Campbell, J. M. Werner, S. T. Arold
Date
:
28 Mar 03 (Deposition) - 21 Oct 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D,F
Biol. Unit 1: A,B,C,D,F (2x)
Keywords
:
4 Helical Bundle, Domain Swapping, Amphiphatic Helix, Transferase
(Keyword Search:
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)
Reference
:
M. K. Hoellerer, M. E. M. Noble, G. Labesse, I. D. Campbell, J. M. Werner, S. T. Arold
Molecular Recognition Of Paxillin Ld Motifs By The Focal Adhesion Targeting Domain
Structure V. 11 1207 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041685 (D1030E, chain A/B/C, )
2: VAR_041686 (K1044E, chain A/B/C, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041685
D
1030
E
FAK1_HUMAN
Polymorphism
---
A/B/C
D
1030
E
2
UniProt
VAR_041686
K
1044
E
FAK1_HUMAN
Unclassified
---
A/B/C
K
1044
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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End label:
Sorry, no Info available
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Exons
(1, 2)
Info
All Exons
Exon 1.8 (D:2-13 | F:2-12)
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All Exon Boundaries
1: Boundary 1.7/1.8
2: Boundary 1.8/1.12
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000228307
1
ENSE00002150335
chr12:
120703563-120703420
144
PAXI_HUMAN
1-5
5
0
-
-
1.4b
ENST00000228307
4b
ENSE00001689444
chr12:
120662180-120661954
227
PAXI_HUMAN
5-80
76
0
-
-
1.5b
ENST00000228307
5b
ENSE00001679472
chr12:
120661636-120661521
116
PAXI_HUMAN
81-119
39
0
-
-
1.6
ENST00000228307
6
ENSE00001768793
chr12:
120660802-120660666
137
PAXI_HUMAN
119-165
47
0
-
-
1.7
ENST00000228307
7
ENSE00001668346
chr12:
120660553-120660352
202
PAXI_HUMAN
165-232
68
0
-
-
1.8
ENST00000228307
8
ENSE00001756096
chr12:
120659561-120659426
136
PAXI_HUMAN
232-277
46
2
D:2-13
F:2-12
12
11
1.12
ENST00000228307
12
ENSE00001729387
chr12:
120653464-120653363
102
PAXI_HUMAN
278-311
34
0
-
-
1.13b
ENST00000228307
13b
ENSE00001653040
chr12:
120653076-120652906
171
PAXI_HUMAN
312-368
57
0
-
-
1.14
ENST00000228307
14
ENSE00001670431
chr12:
120652801-120652628
174
PAXI_HUMAN
369-426
58
0
-
-
1.15
ENST00000228307
15
ENSE00001798560
chr12:
120652020-120651939
82
PAXI_HUMAN
427-454
28
0
-
-
1.16
ENST00000228307
16
ENSE00001667198
chr12:
120651793-120651645
149
PAXI_HUMAN
454-503
50
0
-
-
1.17c
ENST00000228307
17c
ENSE00001473236
chr12:
120650383-120648251
2133
PAXI_HUMAN
504-591
88
0
-
-
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1ow6a_ (A:)
1b: SCOP_d1ow6b_ (B:)
1c: SCOP_d1ow6c_ (C:)
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Protein Domains
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(
)
Organisms
(
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Four-helical up-and-down bundle
(308)
Superfamily
:
FAT domain of focal adhesion kinase
(15)
Family
:
FAT domain of focal adhesion kinase
(11)
Protein domain
:
FAT domain of focal adhesion kinase
(9)
Human (Homo sapiens) [TaxId: 9606]
(5)
1a
d1ow6a_
A:
1b
d1ow6b_
B:
1c
d1ow6c_
C:
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_1ow6A02 (A:946-1049)
1b: CATH_1ow6B02 (B:946-1047)
1c: CATH_1ow6C02 (C:946-1047)
2a: CATH_1ow6B01 (B:909-945)
2b: CATH_1ow6A01 (A:916-945)
2c: CATH_1ow6C01 (C:909-945)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Four Helix Bundle (Hemerythrin (Met), subunit A)
(300)
Homologous Superfamily
:
Nucleotidyltransferases domain 2
(28)
Human (Homo sapiens)
(12)
1a
1ow6A02
A:946-1049
1b
1ow6B02
B:946-1047
1c
1ow6C02
C:946-1047
Topology
:
Single alpha-helices involved in coiled-coils or other helix-helix interfaces
(552)
Homologous Superfamily
:
Single helix bin
(17)
Human (Homo sapiens)
(6)
2a
1ow6B01
B:909-945
2b
1ow6A01
A:916-945
2c
1ow6C01
C:909-945
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Focal_AT_1ow6C01 (C:914-1047)
1b: PFAM_Focal_AT_1ow6C02 (C:914-1047)
1c: PFAM_Focal_AT_1ow6C03 (C:914-1047)
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Clan
:
no clan defined [family: Focal_AT]
(8)
Family
:
Focal_AT
(8)
Homo sapiens (Human)
(4)
1a
Focal_AT-1ow6C01
C:914-1047
1b
Focal_AT-1ow6C02
C:914-1047
1c
Focal_AT-1ow6C03
C:914-1047
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Asym.Unit (77 KB)
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