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Asym. Unit
Info
Asym.Unit (280 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (73 KB)
Biol.Unit 3 (72 KB)
Biol.Unit 4 (73 KB)
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(1)
Title
:
ENDOGLUCANASE I COMPLEXED WITH NON-HYDROLYSABLE SUBSTRATE ANALOGUE
Authors
:
G. Sulzenbacher, G. J. Davies, M. Schulein
Date
:
17 Oct 96 (Deposition) - 29 Oct 97 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Cellulose Degradation, Hydrolase, Glycosidase, Glycoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Sulzenbacher, H. Driguez, B. Henrissat, M. Schulein, G. J. Davies
Structure Of The Fusarium Oxysporum Endoglucanase I With A Nonhydrolyzable Substrate Analogue: Substrate Distortion Gives Rise To The Preferred Axial Orientation For The Leaving Group.
Biochemistry V. 35 15280 1996
(for further references see the
PDB file header
)
[
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Hetero Components
(3, 16)
Info
All Hetero Components
1a: 1,4-DIMERCAPTO-ALPHA-D-GLUCOPYRANO... (DP5a)
1b: 1,4-DIMERCAPTO-ALPHA-D-GLUCOPYRANO... (DP5b)
1c: 1,4-DIMERCAPTO-ALPHA-D-GLUCOPYRANO... (DP5c)
1d: 1,4-DIMERCAPTO-ALPHA-D-GLUCOPYRANO... (DP5d)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
3a: PYROGLUTAMIC ACID (PCAa)
3b: PYROGLUTAMIC ACID (PCAb)
3c: PYROGLUTAMIC ACID (PCAc)
3d: PYROGLUTAMIC ACID (PCAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DP5
4
Ligand/Ion
1,4-DIMERCAPTO-ALPHA-D-GLUCOPYRANOSYL-(1-4)-S-1,4-DIMERCAPTO-BETA-D-GLUCOPYRANOSYL-(1-4)-S-1,4-DIMERCAPTO-BETA-D-GLUCOPYRANOSE
2
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
PCA
4
Mod. Amino Acid
PYROGLUTAMIC ACID
[
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]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: CTA (UNKNOWN)
14: CTB (UNKNOWN)
15: CTC (UNKNOWN)
16: CTD (UNKNOWN)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:42 , ASN A:44 , ASN A:56 , THR A:58 , GLU D:350
BINDING SITE FOR RESIDUE NAG A 399
02
AC2
SOFTWARE
ASN A:247 , ASN A:300
BINDING SITE FOR RESIDUE NAG A 400
03
AC3
SOFTWARE
GLN B:42 , ASN B:44 , ASN B:56 , THR B:58 , HOH B:617 , HOH B:643
BINDING SITE FOR RESIDUE NAG B 399
04
AC4
SOFTWARE
ASN B:247 , ASN B:300 , HOH B:622
BINDING SITE FOR RESIDUE NAG B 400
05
AC5
SOFTWARE
GLN C:42 , ASN C:44 , ASN C:56 , THR C:58 , HOH C:620
BINDING SITE FOR RESIDUE NAG C 399
06
AC6
SOFTWARE
ASN C:247 , ASN C:300 , HOH C:603
BINDING SITE FOR RESIDUE NAG C 400
07
AC7
SOFTWARE
GLU A:350 , GLN D:42 , ASN D:56 , THR D:58 , HOH D:973
BINDING SITE FOR RESIDUE NAG D 399
08
AC8
SOFTWARE
ASN D:247 , ASN D:300
BINDING SITE FOR RESIDUE NAG D 400
09
AC9
SOFTWARE
ARG A:106 , ALA A:143 , TYR A:145 , TYR A:171 , ASP A:173 , GLN A:175 , GLU A:197 , ASP A:199 , GLU A:202 , HIS A:209 , HIS A:213 , ALA A:237 , SER A:345 , TRP A:347 , TRP A:356 , HOH A:451 , HOH A:455 , HOH A:461 , HOH A:463 , HOH A:533
BINDING SITE FOR RESIDUE DP5 A 401
10
BC1
SOFTWARE
ALA B:143 , TYR B:145 , TYR B:171 , ASP B:173 , GLN B:175 , GLU B:197 , ASP B:199 , GLU B:202 , HIS B:209 , HIS B:213 , ALA B:237 , SER B:345 , TRP B:347 , HOH B:455 , HOH B:461 , HOH B:463 , HOH B:533
BINDING SITE FOR RESIDUE DP5 B 401
11
BC2
SOFTWARE
ARG C:106 , ALA C:143 , TYR C:145 , TYR C:171 , ASP C:173 , GLN C:175 , GLU C:197 , ASP C:199 , GLU C:202 , HIS C:209 , HIS C:213 , ALA C:237 , SER C:345 , TRP C:347 , TRP C:356 , HOH C:451 , HOH C:455 , HOH C:461 , HOH C:463 , HOH C:532 , HOH C:623
BINDING SITE FOR RESIDUE DP5 C 401
12
BC3
SOFTWARE
ARG D:106 , TYR D:145 , TYR D:171 , ASP D:173 , GLN D:175 , GLU D:197 , ASP D:199 , GLU D:202 , HIS D:209 , HIS D:213 , ALA D:237 , SER D:345 , TRP D:347 , TRP D:356 , HOH D:527 , HOH D:537 , HOH D:539 , HOH D:609 , HOH D:901 , HOH D:982
BINDING SITE FOR RESIDUE DP5 D 401
13
CTA
UNKNOWN
GLU A:197 , GLU A:202
DP5 BINDING SITE.
14
CTB
UNKNOWN
GLU B:197 , GLU B:202
DP5 BINDING SITE.
15
CTC
UNKNOWN
GLU C:197 , GLU C:202
DP5 BINDING SITE.
16
CTD
UNKNOWN
GLU D:197 , GLU D:202
DP5 BINDING SITE.
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1ovwa_ (A:)
1b: SCOP_d1ovwc_ (C:)
1c: SCOP_d1ovwd_ (D:)
1d: SCOP_d1ovwb_ (B:)
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(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Glycosyl hydrolase family 7 catalytic core
(44)
Protein domain
:
Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1)
(27)
Fungus (Fusarium oxysporum) [TaxId: 5507]
(4)
1a
d1ovwa_
A:
1b
d1ovwc_
C:
1c
d1ovwd_
D:
1d
d1ovwb_
B:
[
close SCOP info
]
CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1ovwA00 (A:2-398)
1b: CATH_1ovwC00 (C:2-398)
1c: CATH_1ovwD00 (D:2-398)
1d: CATH_1ovwB00 (B:2-398)
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Distorted Sandwich
(506)
Topology
:
1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A
(34)
Homologous Superfamily
:
1,4-Beta-D-Glucan Cellobiohydrolase I, subunit A
(34)
Fusarium oxysporum. Organism_taxid: 5507
(4)
1a
1ovwA00
A:2-398
1b
1ovwC00
C:2-398
1c
1ovwD00
D:2-398
1d
1ovwB00
B:2-398
[
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]
Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Glyco_hydro_7_1ovwD01 (D:2-398)
1b: PFAM_Glyco_hydro_7_1ovwD02 (D:2-398)
1c: PFAM_Glyco_hydro_7_1ovwD03 (D:2-398)
1d: PFAM_Glyco_hydro_7_1ovwD04 (D:2-398)
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(
)
Clan
:
Concanavalin
(293)
Family
:
Glyco_hydro_7
(13)
Fusarium oxysporum (Panama disease fungus)
(3)
1a
Glyco_hydro_7-1ovwD01
D:2-398
1b
Glyco_hydro_7-1ovwD02
D:2-398
1c
Glyco_hydro_7-1ovwD03
D:2-398
1d
Glyco_hydro_7-1ovwD04
D:2-398
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Asym.Unit (280 KB)
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Biol.Unit 3 (72 KB)
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