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1OVN
Asym. Unit
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Asym.Unit (77 KB)
Biol.Unit 1 (71 KB)
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(1)
Title
:
CRYSTAL STRUCTURE AND FUNCTIONAL ANALYSIS OF DROSOPHILA WIND-- A PDI-RELATED PROTEIN
Authors
:
Q. Ma, C. Guo, K. Barnewitz, G. M. Sheldrick, H. D. Soling, I. Uson, D. M. Ferrari
Date
:
27 Mar 03 (Deposition) - 24 Feb 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Wind, Windbeutel, Pdi-Dbeta, Pdi, Protein Disulfide Isomerase, Pipe, Dorsal-Ventral Patterning, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Q. Ma, C. Guo, K. Barnewitz, G. M. Sheldrick, H. D. Soling, I. Uson, D. M. Ferrari
Crystal Structure And Functional Analysis Of Drosophila Wind, A Protein-Disulfide Isomerase-Related Protein.
J. Biol. Chem. V. 278 44600 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: CESIUM ION (CSa)
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No.
Name
Count
Type
Full Name
1
CS
1
Ligand/Ion
CESIUM ION
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU B:40 , GLY B:113
BINDING SITE FOR RESIDUE CS B 1
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1ovna1 (A:146-252)
1b: SCOP_d1ovnb1 (B:146-248)
2a: SCOP_d1ovna2 (A:24-145)
2b: SCOP_d1ovnb2 (B:23-145)
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Protein Domains
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Class
:
All alpha proteins
(14657)
Fold
:
ERP29 C domain-like
(13)
Superfamily
:
ERP29 C domain-like
(6)
Family
:
ERP29 C domain-like
(2)
Protein domain
:
Windbeutel, C-terminal domain
(1)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(1)
1a
d1ovna1
A:146-252
1b
d1ovnb1
B:146-248
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
ERP29 N domain-like
(6)
Protein domain
:
Windbeutel, N-terminal domain
(1)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(1)
2a
d1ovna2
A:24-145
2b
d1ovnb2
B:23-145
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1ovnA01 (A:24-145)
1b: CATH_1ovnB01 (B:23-145)
2a: CATH_1ovnB02 (B:146-248)
2b: CATH_1ovnA02 (A:146-252)
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Homologous Superfamilies
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Organisms
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)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Fruit fly (Drosophila melanogaster)
(9)
1a
1ovnA01
A:24-145
1b
1ovnB01
B:23-145
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Endoplasmic reticulum protein erp29
(6)
Homologous Superfamily
:
[code=1.20.1150.12, no name defined]
(6)
Fruit fly (Drosophila melanogaster)
(5)
2a
1ovnB02
B:146-248
2b
1ovnA02
A:146-252
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_ERp29_N_1ovnB01 (B:23-147)
1b: PFAM_ERp29_N_1ovnB02 (B:23-147)
2a: PFAM_ERp29_1ovnB03 (B:148-243)
2b: PFAM_ERp29_1ovnB04 (B:148-243)
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Clan
:
Thioredoxin
(367)
Family
:
ERp29_N
(2)
Drosophila melanogaster (Fruit fly)
(1)
1a
ERp29_N-1ovnB01
B:23-147
1b
ERp29_N-1ovnB02
B:23-147
Clan
:
no clan defined [family: ERp29]
(2)
Family
:
ERp29
(2)
Drosophila melanogaster (Fruit fly)
(1)
2a
ERp29-1ovnB03
B:148-243
2b
ERp29-1ovnB04
B:148-243
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