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1OU9
Biol. Unit 2
Info
Asym.Unit (66 KB)
Biol.Unit 1 (44 KB)
Biol.Unit 2 (40 KB)
Biol.Unit 3 (120 KB)
Biol.Unit 4 (120 KB)
Biol.Unit 5 (61 KB)
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(1)
Title
:
STRUCTURE OF SSPB, A AAA+ PROTEASE DELIVERY PROTEIN
Authors
:
I. Levchenko, R. A. Grant, D. A. Wah, R. T. Sauer, T. A. Baker
Date
:
24 Mar 03 (Deposition) - 23 Sep 03 (Release) - 30 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (2x)
Biol. Unit 2: B,C (1x)
Biol. Unit 3: A,B,C (2x)
Biol. Unit 4: A,B,C (2x)
Biol. Unit 5: A,B,C (1x)
Keywords
:
Ssra Peptide-Binding Protein, Homodimer, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Levchenko, R. A. Grant, D. A. Wah, R. T. Sauer, T. A. Baker
Structure Of A Delivery Protein For An Aaa+ Protease In Complex With A Peptide Degradation Tag
Mol. Cell V. 12 365 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
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No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
MSE
4
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:56 , THR A:59 , HOH A:136 , HOH A:192 , GLN C:70 , GLU C:81
BINDING SITE FOR RESIDUE CA A 130
2
AC2
SOFTWARE
GLN A:70 , GLU A:81 , ALA B:56 , THR B:59 , HOH B:132 , HOH B:134
BINDING SITE FOR RESIDUE CA A 131
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1ou9a_ (A:)
1b: SCOP_d1ou9b_ (B:)
1c: SCOP_d1ou9c_ (C:)
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)
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)
Protein Domains
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)
(
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
SspB-like
(10)
Superfamily
:
SspB-like
(10)
Family
:
Stringent starvation protein B, SspB
(8)
Protein domain
:
Stringent starvation protein B, SspB
(7)
Haemophilus influenzae [TaxId: 727]
(5)
1a
d1ou9a_
A:
1b
d1ou9b_
B:
1c
d1ou9c_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1ou9B00 (B:4-114)
1b: CATH_1ou9C00 (C:5-121)
1c: CATH_1ou9A00 (A:2-121)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
Stringent starvation protein B, SspB
(11)
Haemophilus influenzae. Organism_taxid: 727.
(5)
1a
1ou9B00
B:4-114
1b
1ou9C00
C:5-121
1c
1ou9A00
A:2-121
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_SspB_1ou9C01 (C:5-121)
1b: PFAM_SspB_1ou9C02 (C:5-121)
1c: PFAM_SspB_1ou9C03 (C:5-121)
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Clans
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(
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)
(
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Clan
:
no clan defined [family: SspB]
(10)
Family
:
SspB
(10)
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
(5)
1a
SspB-1ou9C01
C:5-121
1b
SspB-1ou9C02
C:5-121
1c
SspB-1ou9C03
C:5-121
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (66 KB)
Header - Asym.Unit
Biol.Unit 1 (44 KB)
Header - Biol.Unit 1
Biol.Unit 2 (40 KB)
Header - Biol.Unit 2
Biol.Unit 3 (120 KB)
Header - Biol.Unit 3
Biol.Unit 4 (120 KB)
Header - Biol.Unit 4
Biol.Unit 5 (61 KB)
Header - Biol.Unit 5
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