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1OPU
Theor. Model
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Theoretical Model (26 KB)
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Title
:
A THEORETICALLY MODELED 3-DIMENSIONAL STRUCTURE OF HUMAN ADENINE PHOSPHORIBOSYLTRANSFERASE
Authors
:
P. Ajaybabu, S. C. Mallena
Date
:
06 Mar 03 (Deposition) - 15 Apr 03 (Release) - 15 Apr 03 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Transferase, Glycosyltransferase, Purine Salvage, Disease Mutation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Ajaybabu, S. C. Mallena
A Theoretically Modeled 3-Dimensional Structure Of Human Adenine Phosphoribosyltransferase
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(9, 9)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_069049 (L32P, chain A, )
2: VAR_006747 (D64V, chain A, )
3: VAR_069050 (V83M, chain A, )
4: VAR_006748 (L109P, chain A, )
5: VAR_019055 (Q120R, chain A, )
6: VAR_069051 (G132D, chain A, )
7: VAR_006749 (M135T, chain A, )
8: VAR_022608 (V149F, chain A, )
9: VAR_022609 (C152R, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_069049
L
33
P
APT_HUMAN
Disease (APRTD)
---
A
L
32
P
2
UniProt
VAR_006747
D
65
V
APT_HUMAN
Disease (APRTD)
---
A
D
64
V
3
UniProt
VAR_069050
V
84
M
APT_HUMAN
Disease (APRTD)
200392753
A
V
83
M
4
UniProt
VAR_006748
L
110
P
APT_HUMAN
Disease (APRTD)
---
A
L
109
P
5
UniProt
VAR_019055
Q
121
R
APT_HUMAN
Polymorphism
8191494
A
Q
120
R
6
UniProt
VAR_069051
G
133
D
APT_HUMAN
Disease (APRTD)
---
A
G
132
D
7
UniProt
VAR_006749
M
136
T
APT_HUMAN
Disease (APRTD)
28999113
A
M
135
T
8
UniProt
VAR_022608
V
150
F
APT_HUMAN
Disease (APRTD)
---
A
V
149
F
9
UniProt
VAR_022609
C
153
R
APT_HUMAN
Disease (APRTD)
---
A
C
152
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PUR_PYR_PR_TRANSFER (A:122-134)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PUR_PYR_PR_TRANSFER
PS00103
Purine/pyrimidine phosphoribosyl transferases signature.
APT_HUMAN
123-135
1
A:122-134
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Exons
(5, 5)
Info
All Exons
Exon 1.1 (A:1-26)
Exon 1.2 (A:26-62)
Exon 1.3 (A:62-106)
Exon 1.4 (A:107-133)
Exon 1.5a (A:133-179)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5a
6: Boundary 1.5a/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000378364
1
ENSE00001436135
chr16:
88878342-88878228
115
APT_HUMAN
1-27
27
1
A:1-26
26
1.2
ENST00000378364
2
ENSE00001503918
chr16:
88878064-88877958
107
APT_HUMAN
27-63
37
1
A:26-62
37
1.3
ENST00000378364
3
ENSE00001503917
chr16:
88876964-88876831
134
APT_HUMAN
63-107
45
1
A:62-106
45
1.4
ENST00000378364
4
ENSE00001436356
chr16:
88876556-88876478
79
APT_HUMAN
108-134
27
1
A:107-133
27
1.5a
ENST00000378364
5a
ENSE00001436502
chr16:
88876248-88875877
372
APT_HUMAN
134-180
47
1
A:133-179
47
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SCOP Domains
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Pfam Domains
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