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Biol. Unit 1
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Asym.Unit (60 KB)
Biol.Unit 1 (55 KB)
Biol.Unit 2 (162 KB)
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(1)
Title
:
UNMETHYLATED FORM OF C-PHYCOCYANIN FROM THEMOSYNECHOCOCCUS VULCANUS AT 2.7A
Authors
:
N. Adir, N. Lerner
Date
:
27 Feb 03 (Deposition) - 29 Jul 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (3x)
Keywords
:
Photosynthesis, Antenna, Phycobilisome, Cyanobacteria
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Adir, N. Lerner
The Crystal Structure Of A Novel Unmethylated Form Of C-Phycocyanin, A Possible Connector Between Cores And Rods In Pycobilisomes
J. Biol. Chem. V. 278 25926 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: PHYCOCYANOBILIN (CYCa)
1b: PHYCOCYANOBILIN (CYCb)
1c: PHYCOCYANOBILIN (CYCc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CYC
3
Ligand/Ion
PHYCOCYANOBILIN
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:59 , THR A:66 , SER A:72 , GLN A:73 , TYR A:74 , ALA A:75 , LYS A:83 , CYS A:84 , ARG A:86 , ASP A:87 , TYR A:110 , PHE A:122 , TRP A:128 , TYR A:129 , ARG B:57 , ILE B:67 , TYR B:76 , THR B:77 , ASN B:78
BINDING SITE FOR RESIDUE CYC A 484
2
AC2
SOFTWARE
LEU B:66 , ASN B:72 , ALA B:75 , ARG B:79 , ARG B:80 , CYS B:84 , ARG B:86 , ASP B:87 , ILE B:90 , ARG B:110 , LEU B:115 , TYR B:119 , LEU B:122 , THR B:124 , SER B:128
BINDING SITE FOR RESIDUE CYC B 584
3
AC3
SOFTWARE
GLN A:25 , ASP A:28 , HOH A:489 , ASN B:35 , ASP B:39 , ASN B:145 , ASP B:146 , ILE B:150 , THR B:151 , PRO B:152 , GLY B:153 , CYS B:155 , SER B:156 , SER B:160 , ALA B:163
BINDING SITE FOR RESIDUE CYC B 555
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1on7a_ (A:)
2a: SCOP_d1on7b_ (B:)
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Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Phycocyanin-like phycobilisome proteins
(65)
Protein domain
:
Phycocyanin alpha subunit
(16)
Synechococcus vulcanus [TaxId: 32053]
(8)
1a
d1on7a_
A:
Protein domain
:
Phycocyanin beta subunit
(15)
Synechococcus vulcanus [TaxId: 32053]
(6)
2a
d1on7b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1on7B00 (B:1-174)
1b: CATH_1on7A00 (A:1-174)
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Organisms
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)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Globin-like
(786)
Homologous Superfamily
:
Phycocyanins
(32)
Thermosynechococcus vulcanus. Organism_taxid: 32053.
(1)
1a
1on7B00
B:1-174
1b
1on7A00
A:1-174
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Phycobilisome_1on7B01 (B:6-174)
1b: PFAM_Phycobilisome_1on7A01 (A:6-174)
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Clan
:
Globin
(291)
Family
:
Phycobilisome
(15)
Thermosynechococcus vulcanus (Synechococcus vulcanus)
(3)
1a
Phycobilisome-1on7B01
B:6-174
1b
Phycobilisome-1on7A01
A:6-174
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Asym.Unit (60 KB)
Header - Asym.Unit
Biol.Unit 1 (55 KB)
Header - Biol.Unit 1
Biol.Unit 2 (162 KB)
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