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1OLG
Asym. Unit
Info
Asym.Unit (56 KB)
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(1)
Title
:
HIGH-RESOLUTION SOLUTION STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR
Authors
:
G. M. Clore, J. G. Omichinski, A. M. Gronenborn
Date
:
13 Jun 94 (Deposition) - 26 Jan 95 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C,D
Keywords
:
Anti-Oncogene
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. M. Clore, J. G. Omichinski, K. Sakaguchi, N. Zambrano, H. Sakamoto, E. Appella, A. M. Gronenborn
High-Resolution Structure Of The Oligomerization Domain Of P53 By Multidimensional Nmr.
Science V. 265 386 1994
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(0, 0)
Info
All Hetero Components
View:
Select:
Label:
Sorry, no Info available
[
close Hetero component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(71, 284)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_045504 (K319E, chain A/B/C/D, )
02: VAR_045505 (K319N, chain A/B/C/D, )
03: VAR_045506 (K319R, chain A/B/C/D, )
04: VAR_045507 (K320N, chain A/B/C/D, )
05: VAR_045508 (K321E, chain A/B/C/D, )
06: VAR_045509 (K321R, chain A/B/C/D, )
07: VAR_045510 (P322L, chain A/B/C/D, )
08: VAR_045511 (P322R, chain A/B/C/D, )
09: VAR_045874 (L323G, chain A/B/C/D, )
10: VAR_045512 (L323M, chain A/B/C/D, )
11: VAR_045513 (L323P, chain A/B/C/D, )
12: VAR_045514 (L323R, chain A/B/C/D, )
13: VAR_047211 (L323V, chain A/B/C/D, )
14: VAR_045515 (D324E, chain A/B/C/D, )
15: VAR_045875 (D324S, chain A/B/C/D, )
16: VAR_045516 (D324Y, chain A/B/C/D, )
17: VAR_045517 (G325A, chain A/B/C/D, )
18: VAR_045518 (G325E, chain A/B/C/D, )
19: VAR_006039 (G325V, chain A/B/C/D, )
20: VAR_045519 (E326G, chain A/B/C/D, )
21: VAR_045520 (Y327H, chain A/B/C/D, )
22: VAR_045521 (Y327S, chain A/B/C/D, )
23: VAR_045522 (F328L, chain A/B/C/D, )
24: VAR_045523 (F328S, chain A/B/C/D, )
25: VAR_045524 (F328V, chain A/B/C/D, )
26: VAR_045525 (T329I, chain A/B/C/D, )
27: VAR_045526 (T329S, chain A/B/C/D, )
28: VAR_045527 (L330H, chain A/B/C/D, )
29: VAR_047212 (L330P, chain A/B/C/D, )
30: VAR_045528 (L330R, chain A/B/C/D, )
31: VAR_045529 (Q331H, chain A/B/C/D, )
32: VAR_045530 (Q331P, chain A/B/C/D, )
33: VAR_045531 (Q331R, chain A/B/C/D, )
34: VAR_045532 (I332V, chain A/B/C/D, )
35: VAR_006040 (G334V, chain A/B/C/D, )
36: VAR_045533 (G334W, chain A/B/C/D, )
37: VAR_045534 (R335G, chain A/B/C/D, )
38: VAR_045535 (R335H, chain A/B/C/D, )
39: VAR_045536 (R335L, chain A/B/C/D, )
40: VAR_006041 (R337C, chain A/B/C/D, )
41: VAR_035016 (R337H, chain A/B/C/D, )
42: VAR_045537 (R337L, chain A/B/C/D, )
43: VAR_045538 (R337P, chain A/B/C/D, )
44: VAR_045539 (F338I, chain A/B/C/D, )
45: VAR_045540 (F338L, chain A/B/C/D, )
46: VAR_022316 (E339K, chain A/B/C/D, )
47: VAR_045541 (E339Q, chain A/B/C/D, )
48: VAR_045542 (F341C, chain A/B/C/D, )
49: VAR_045543 (R342L, chain A/B/C/D, )
50: VAR_045544 (R342P, chain A/B/C/D, )
51: VAR_047213 (R342Q, chain A/B/C/D, )
52: VAR_045545 (E343G, chain A/B/C/D, )
53: VAR_045546 (L344P, chain A/B/C/D, )
54: VAR_045547 (L344R, chain A/B/C/D, )
55: VAR_045548 (E346A, chain A/B/C/D, )
56: VAR_045549 (A347G, chain A/B/C/D, )
57: VAR_045550 (A347T, chain A/B/C/D, )
58: VAR_045551 (L348F, chain A/B/C/D, )
59: VAR_045552 (L348S, chain A/B/C/D, )
60: VAR_045553 (E349D, chain A/B/C/D, )
61: VAR_045554 (D352H, chain A/B/C/D, )
62: VAR_045555 (A353T, chain A/B/C/D, )
63: VAR_045556 (Q354E, chain A/B/C/D, )
64: VAR_045557 (Q354K, chain A/B/C/D, )
65: VAR_047214 (Q354R, chain A/B/C/D, )
66: VAR_045558 (G356A, chain A/B/C/D, )
67: VAR_045559 (G356W, chain A/B/C/D, )
68: VAR_045560 (E358D, chain A/B/C/D, )
69: VAR_045561 (E358K, chain A/B/C/D, )
70: VAR_045562 (G360A, chain A/B/C/D, )
71: VAR_045563 (G360V, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_045504
K
319
E
P53_HUMAN
Unclassified
---
A/B/C/D
K
319
E
02
UniProt
VAR_045505
K
319
N
P53_HUMAN
Unclassified
---
A/B/C/D
K
319
N
03
UniProt
VAR_045506
K
319
R
P53_HUMAN
Unclassified
---
A/B/C/D
K
319
R
04
UniProt
VAR_045507
K
320
N
P53_HUMAN
Unclassified
---
A/B/C/D
K
320
N
05
UniProt
VAR_045508
K
321
E
P53_HUMAN
Unclassified
---
A/B/C/D
K
321
E
06
UniProt
VAR_045509
K
321
R
P53_HUMAN
Unclassified
---
A/B/C/D
K
321
R
07
UniProt
VAR_045510
P
322
L
P53_HUMAN
Unclassified
---
A/B/C/D
P
322
L
08
UniProt
VAR_045511
P
322
R
P53_HUMAN
Unclassified
---
A/B/C/D
P
322
R
09
UniProt
VAR_045874
L
323
G
P53_HUMAN
Unclassified
---
A/B/C/D
L
323
G
10
UniProt
VAR_045512
L
323
M
P53_HUMAN
Unclassified
---
A/B/C/D
L
323
M
11
UniProt
VAR_045513
L
323
P
P53_HUMAN
Unclassified
---
A/B/C/D
L
323
P
12
UniProt
VAR_045514
L
323
R
P53_HUMAN
Unclassified
---
A/B/C/D
L
323
R
13
UniProt
VAR_047211
L
323
V
P53_HUMAN
Unclassified
---
A/B/C/D
L
323
V
14
UniProt
VAR_045515
D
324
E
P53_HUMAN
Unclassified
---
A/B/C/D
D
324
E
15
UniProt
VAR_045875
D
324
S
P53_HUMAN
Unclassified
---
A/B/C/D
D
324
S
16
UniProt
VAR_045516
D
324
Y
P53_HUMAN
Unclassified
---
A/B/C/D
D
324
Y
17
UniProt
VAR_045517
G
325
A
P53_HUMAN
Unclassified
---
A/B/C/D
G
325
A
18
UniProt
VAR_045518
G
325
E
P53_HUMAN
Unclassified
---
A/B/C/D
G
325
E
19
UniProt
VAR_006039
G
325
V
P53_HUMAN
Disease (LFS)
28934271
A/B/C/D
G
325
V
20
UniProt
VAR_045519
E
326
G
P53_HUMAN
Unclassified
---
A/B/C/D
E
326
G
21
UniProt
VAR_045520
Y
327
H
P53_HUMAN
Unclassified
---
A/B/C/D
Y
327
H
22
UniProt
VAR_045521
Y
327
S
P53_HUMAN
Unclassified
---
A/B/C/D
Y
327
S
23
UniProt
VAR_045522
F
328
L
P53_HUMAN
Unclassified
---
A/B/C/D
F
328
L
24
UniProt
VAR_045523
F
328
S
P53_HUMAN
Unclassified
---
A/B/C/D
F
328
S
25
UniProt
VAR_045524
F
328
V
P53_HUMAN
Unclassified
---
A/B/C/D
F
328
V
26
UniProt
VAR_045525
T
329
I
P53_HUMAN
Unclassified
---
A/B/C/D
T
329
I
27
UniProt
VAR_045526
T
329
S
P53_HUMAN
Unclassified
---
A/B/C/D
T
329
S
28
UniProt
VAR_045527
L
330
H
P53_HUMAN
Unclassified
---
A/B/C/D
L
330
H
29
UniProt
VAR_047212
L
330
P
P53_HUMAN
Unclassified
---
A/B/C/D
L
330
P
30
UniProt
VAR_045528
L
330
R
P53_HUMAN
Unclassified
---
A/B/C/D
L
330
R
31
UniProt
VAR_045529
Q
331
H
P53_HUMAN
Unclassified
---
A/B/C/D
Q
331
H
32
UniProt
VAR_045530
Q
331
P
P53_HUMAN
Unclassified
---
A/B/C/D
Q
331
P
33
UniProt
VAR_045531
Q
331
R
P53_HUMAN
Unclassified
---
A/B/C/D
Q
331
R
34
UniProt
VAR_045532
I
332
V
P53_HUMAN
Unclassified
---
A/B/C/D
I
332
V
35
UniProt
VAR_006040
G
334
V
P53_HUMAN
Unclassified
---
A/B/C/D
G
334
V
36
UniProt
VAR_045533
G
334
W
P53_HUMAN
Unclassified
---
A/B/C/D
G
334
W
37
UniProt
VAR_045534
R
335
G
P53_HUMAN
Unclassified
---
A/B/C/D
R
335
G
38
UniProt
VAR_045535
R
335
H
P53_HUMAN
Unclassified
---
A/B/C/D
R
335
H
39
UniProt
VAR_045536
R
335
L
P53_HUMAN
Unclassified
---
A/B/C/D
R
335
L
40
UniProt
VAR_006041
R
337
C
P53_HUMAN
Disease (LFS)
---
A/B/C/D
R
337
C
41
UniProt
VAR_035016
R
337
H
P53_HUMAN
Disease (LFS)
---
A/B/C/D
R
337
H
42
UniProt
VAR_045537
R
337
L
P53_HUMAN
Unclassified
---
A/B/C/D
R
337
L
43
UniProt
VAR_045538
R
337
P
P53_HUMAN
Unclassified
---
A/B/C/D
R
337
P
44
UniProt
VAR_045539
F
338
I
P53_HUMAN
Unclassified
---
A/B/C/D
F
338
I
45
UniProt
VAR_045540
F
338
L
P53_HUMAN
Unclassified
---
A/B/C/D
F
338
L
46
UniProt
VAR_022316
E
339
K
P53_HUMAN
Unclassified
17882252
A/B/C/D
E
339
K
47
UniProt
VAR_045541
E
339
Q
P53_HUMAN
Unclassified
---
A/B/C/D
E
339
Q
48
UniProt
VAR_045542
F
341
C
P53_HUMAN
Unclassified
---
A/B/C/D
F
341
C
49
UniProt
VAR_045543
R
342
L
P53_HUMAN
Unclassified
---
A/B/C/D
R
342
L
50
UniProt
VAR_045544
R
342
P
P53_HUMAN
Unclassified
---
A/B/C/D
R
342
P
51
UniProt
VAR_047213
R
342
Q
P53_HUMAN
Unclassified
---
A/B/C/D
R
342
Q
52
UniProt
VAR_045545
E
343
G
P53_HUMAN
Unclassified
---
A/B/C/D
E
343
G
53
UniProt
VAR_045546
L
344
P
P53_HUMAN
Disease (LFS)
---
A/B/C/D
L
344
P
54
UniProt
VAR_045547
L
344
R
P53_HUMAN
Unclassified
---
A/B/C/D
L
344
R
55
UniProt
VAR_045548
E
346
A
P53_HUMAN
Unclassified
---
A/B/C/D
E
346
A
56
UniProt
VAR_045549
A
347
G
P53_HUMAN
Unclassified
---
A/B/C/D
A
347
G
57
UniProt
VAR_045550
A
347
T
P53_HUMAN
Unclassified
---
A/B/C/D
A
347
T
58
UniProt
VAR_045551
L
348
F
P53_HUMAN
Unclassified
---
A/B/C/D
L
348
F
59
UniProt
VAR_045552
L
348
S
P53_HUMAN
Unclassified
---
A/B/C/D
L
348
S
60
UniProt
VAR_045553
E
349
D
P53_HUMAN
Unclassified
---
A/B/C/D
E
349
D
61
UniProt
VAR_045554
D
352
H
P53_HUMAN
Unclassified
---
A/B/C/D
D
352
H
62
UniProt
VAR_045555
A
353
T
P53_HUMAN
Unclassified
---
A/B/C/D
A
353
T
63
UniProt
VAR_045556
Q
354
E
P53_HUMAN
Unclassified
---
A/B/C/D
Q
354
E
64
UniProt
VAR_045557
Q
354
K
P53_HUMAN
Unclassified
---
A/B/C/D
Q
354
K
65
UniProt
VAR_047214
Q
354
R
P53_HUMAN
Unclassified
---
A/B/C/D
Q
354
R
66
UniProt
VAR_045558
G
356
A
P53_HUMAN
Unclassified
---
A/B/C/D
G
356
A
67
UniProt
VAR_045559
G
356
W
P53_HUMAN
Unclassified
---
A/B/C/D
G
356
W
68
UniProt
VAR_045560
E
358
D
P53_HUMAN
Unclassified
---
A/B/C/D
E
358
D
69
UniProt
VAR_045561
E
358
K
P53_HUMAN
Unclassified
---
A/B/C/D
E
358
K
70
UniProt
VAR_045562
G
360
A
P53_HUMAN
Polymorphism
35993958
A/B/C/D
G
360
A
71
UniProt
VAR_045563
G
360
V
P53_HUMAN
Unclassified
---
A/B/C/D
G
360
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(2, 8)
Info
All Exons
Exon 1.9 (A:319-331 | B:319-331 | C:319-331 ...)
Exon 1.11 (A:332-360 | B:332-360 | C:332-360 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.8/1.9
2: Boundary 1.9/1.11
3: Boundary 1.11/1.12d
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000269305
1a
ENSE00001146308
chr17:
7590856-7590695
162
P53_HUMAN
-
0
0
-
-
1.3a
ENST00000269305
3a
ENSE00002194362
chr17:
7579940-7579839
102
P53_HUMAN
1-25
25
0
-
-
1.3d
ENST00000269305
3d
ENSE00001710434
chr17:
7579721-7579700
22
P53_HUMAN
25-32
8
0
-
-
1.4b
ENST00000269305
4b
ENSE00001718735
chr17:
7579590-7579312
279
P53_HUMAN
33-125
93
0
-
-
1.5d
ENST00000269305
5d
ENSE00001255919
chr17:
7578554-7578371
184
P53_HUMAN
126-187
62
0
-
-
1.6a
ENST00000269305
6a
ENSE00001255912
chr17:
7578289-7578177
113
P53_HUMAN
187-224
38
0
-
-
1.7b
ENST00000269305
7b
ENSE00001665758
chr17:
7577608-7577499
110
P53_HUMAN
225-261
37
0
-
-
1.8
ENST00000269305
8
ENSE00001789298
chr17:
7577155-7577019
137
P53_HUMAN
261-307
47
0
-
-
1.9
ENST00000269305
9
ENSE00002149110
chr17:
7576926-7576853
74
P53_HUMAN
307-331
25
4
A:319-331
B:319-331
C:319-331
D:319-331
13
13
13
13
1.11
ENST00000269305
11
ENSE00001728015
chr17:
7574033-7573927
107
P53_HUMAN
332-367
36
4
A:332-360
B:332-360
C:332-360
D:332-360
29
29
29
29
1.12d
ENST00000269305
12d
ENSE00001757276
chr17:
7573008-7571720
1289
P53_HUMAN
367-393
27
0
-
-
[
close EXON info
]
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1olga_ (A:)
1b: SCOP_d1olgb_ (B:)
1c: SCOP_d1olgc_ (C:)
1d: SCOP_d1olgd_ (D:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
p53 tetramerization domain
(14)
Superfamily
:
p53 tetramerization domain
(14)
Family
:
p53 tetramerization domain
(14)
Protein domain
:
p53 tetramerization domain
(14)
Human (Homo sapiens) [TaxId: 9606]
(14)
1a
d1olga_
A:
1b
d1olgb_
B:
1c
d1olgc_
C:
1d
d1olgd_
D:
[
close SCOP info
]
CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1olgA00 (A:319-360)
1b: CATH_1olgB00 (B:319-360)
1c: CATH_1olgC00 (C:319-360)
1d: CATH_1olgD00 (D:319-360)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Few Secondary Structures
(1120)
Architecture
:
Irregular
(1120)
Topology
:
p53, subunit A
(8)
Homologous Superfamily
:
p53, subunit A
(8)
Human (Homo sapiens)
(8)
1a
1olgA00
A:319-360
1b
1olgB00
B:319-360
1c
1olgC00
C:319-360
1d
1olgD00
D:319-360
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Pfam Domains
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1a: PFAM_P53_tetramer_1olgD01 (D:319-359)
1b: PFAM_P53_tetramer_1olgD02 (D:319-359)
1c: PFAM_P53_tetramer_1olgD03 (D:319-359)
1d: PFAM_P53_tetramer_1olgD04 (D:319-359)
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no clan defined [family: P53_tetramer]
(16)
Family
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P53_tetramer
(16)
Homo sapiens (Human)
(16)
1a
P53_tetramer-1olgD01
D:319-359
1b
P53_tetramer-1olgD02
D:319-359
1c
P53_tetramer-1olgD03
D:319-359
1d
P53_tetramer-1olgD04
D:319-359
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