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Asym. Unit
Info
Asym.Unit (407 KB)
Biol.Unit 1 (203 KB)
Biol.Unit 2 (204 KB)
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(1)
Title
:
ARCHAEAL FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE COVALENTLY BOUND TO THE SUBSTRATE DIHYDROXYACETONE PHOSPHATE
Authors
:
E. Lorentzen, P. Zwart, A. Stark, R. Hensel, B. Siebers, E. Pohl
Date
:
17 Jul 03 (Deposition) - 04 Sep 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Aldolase, Fructose 1, 6-Bisphosphate, Tim Barrel, Glycolytic, Archaeal, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Lorentzen, E. Pohl, P. Zwart, A. Stark, R. Russell, T. Knura, R. Hensel, B. Siebers
Crystal Structure Of An Archaeal Class I Aldolase And The Evolution Of (Beta Alpha)8 Barrel Proteins
J. Biol. Chem. V. 278 47253 2003
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Hetero Components
(1, 10)
Info
All Hetero Components
1a: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pa)
1b: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pb)
1c: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pc)
1d: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pd)
1e: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pe)
1f: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pf)
1g: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pg)
1h: 1,3-DIHYDROXYACETONEPHOSPHATE (13Ph)
1i: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pi)
1j: 1,3-DIHYDROXYACETONEPHOSPHATE (13Pj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
13P
10
Ligand/Ion
1,3-DIHYDROXYACETONEPHOSPHATE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:22 , ASP A:24 , HIS A:25 , TRP A:144 , LYS A:177 , GLY A:203 , GLY A:204 , ALA A:229 , VAL A:230 , GLY A:231 , ARG A:232 , HOH A:2072
BINDING SITE FOR RESIDUE 13P A1254
02
AC2
SOFTWARE
ALA B:22 , ASP B:24 , HIS B:25 , TRP B:144 , LYS B:177 , GLY B:203 , GLY B:204 , ALA B:229 , VAL B:230 , GLY B:231 , ARG B:232 , HOH B:2066
BINDING SITE FOR RESIDUE 13P B1254
03
AC3
SOFTWARE
ALA C:22 , ASP C:24 , HIS C:25 , TRP C:144 , LYS C:177 , SER C:202 , GLY C:203 , GLY C:204 , ALA C:229 , VAL C:230 , GLY C:231 , ARG C:232 , HOH C:2056
BINDING SITE FOR RESIDUE 13P C1254
04
AC4
SOFTWARE
ASP D:24 , HIS D:25 , TRP D:144 , LYS D:177 , SER D:202 , GLY D:203 , GLY D:204 , ALA D:229 , VAL D:230 , GLY D:231 , ARG D:232 , HOH D:2052 , HOH D:2053
BINDING SITE FOR RESIDUE 13P D1254
05
AC5
SOFTWARE
ALA E:22 , ASP E:24 , HIS E:25 , TRP E:144 , LYS E:177 , SER E:202 , GLY E:203 , GLY E:204 , ALA E:229 , VAL E:230 , GLY E:231 , ARG E:232 , HOH E:2061 , HOH E:2062 , HOH E:2063
BINDING SITE FOR RESIDUE 13P E1256
06
AC6
SOFTWARE
ASP F:24 , HIS F:25 , TRP F:144 , LYS F:177 , SER F:202 , GLY F:203 , GLY F:204 , ALA F:229 , VAL F:230 , GLY F:231 , ARG F:232 , HOH F:2050 , HOH F:2051
BINDING SITE FOR RESIDUE 13P F1254
07
AC7
SOFTWARE
ALA G:22 , ASP G:24 , HIS G:25 , TRP G:144 , LYS G:177 , GLY G:203 , GLY G:204 , ALA G:229 , VAL G:230 , GLY G:231 , ARG G:232 , HOH G:2076
BINDING SITE FOR RESIDUE 13P G1254
08
AC8
SOFTWARE
ALA H:22 , ASP H:24 , HIS H:25 , TRP H:144 , TYR H:146 , LYS H:177 , GLY H:203 , GLY H:204 , ALA H:229 , VAL H:230 , GLY H:231 , ARG H:232 , HOH H:2067 , HOH H:2068
BINDING SITE FOR RESIDUE 13P H1254
09
AC9
SOFTWARE
ALA I:22 , ASP I:24 , HIS I:25 , TRP I:144 , LYS I:177 , SER I:202 , GLY I:203 , GLY I:204 , ALA I:229 , VAL I:230 , GLY I:231 , ARG I:232 , HOH I:2070 , HOH I:2071
BINDING SITE FOR RESIDUE 13P I1254
10
BC1
SOFTWARE
ALA J:22 , ASP J:24 , HIS J:25 , TRP J:144 , LYS J:177 , SER J:202 , GLY J:203 , GLY J:204 , ALA J:229 , VAL J:230 , GLY J:231 , ARG J:232 , HOH J:2063 , HOH J:2064 , HOH J:2065
BINDING SITE FOR RESIDUE 13P J1254
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d1ok4a_ (A:)
1b: SCOP_d1ok4b_ (B:)
1c: SCOP_d1ok4c_ (C:)
1d: SCOP_d1ok4d_ (D:)
1e: SCOP_d1ok4e_ (E:)
1f: SCOP_d1ok4f_ (F:)
1g: SCOP_d1ok4g_ (G:)
1h: SCOP_d1ok4h_ (H:)
1i: SCOP_d1ok4i_ (I:)
1j: SCOP_d1ok4j_ (J:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
Archaeal fructose 1,6-bisphosphate aldolase
(5)
Thermoproteus tenax [TaxId: 2271]
(5)
1a
d1ok4a_
A:
1b
d1ok4b_
B:
1c
d1ok4c_
C:
1d
d1ok4d_
D:
1e
d1ok4e_
E:
1f
d1ok4f_
F:
1g
d1ok4g_
G:
1h
d1ok4h_
H:
1i
d1ok4i_
I:
1j
d1ok4j_
J:
[
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CATH Domains
(1, 10)
Info
all CATH domains
1a: CATH_1ok4E00 (E:3-255)
1b: CATH_1ok4A00 (A:3-253)
1c: CATH_1ok4B00 (B:3-253)
1d: CATH_1ok4C00 (C:3-253)
1e: CATH_1ok4D00 (D:3-253)
1f: CATH_1ok4F00 (F:3-253)
1g: CATH_1ok4G00 (G:3-253)
1h: CATH_1ok4H00 (H:3-253)
1i: CATH_1ok4I00 (I:3-253)
1j: CATH_1ok4J00 (J:3-253)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Thermoproteus tenax. Organism_taxid: 2271.
(6)
1a
1ok4E00
E:3-255
1b
1ok4A00
A:3-253
1c
1ok4B00
B:3-253
1d
1ok4C00
C:3-253
1e
1ok4D00
D:3-253
1f
1ok4F00
F:3-253
1g
1ok4G00
G:3-253
1h
1ok4H00
H:3-253
1i
1ok4I00
I:3-253
1j
1ok4J00
J:3-253
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Pfam Domains
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Chain J
Asymmetric Unit 1
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