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1OH3
Biol. Unit 1
Info
Asym.Unit (59 KB)
Biol.Unit 1 (29 KB)
Biol.Unit 2 (26 KB)
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(1)
Title
:
E78R MUTANT OF A CARBOHYDRATE BINDING MODULE FAMILY 29
Authors
:
D. Nurizzo, H. J. Gilbert, G. J. Davies
Date
:
21 May 03 (Deposition) - 27 May 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Carbohydrate Binding Domain, Glucomannan, Cellohexaose, Mannohexaose, Cellulosome, Ncp1
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Flint, D. Nurizzo, S. E. Harding, E. Longman, G. J. Davies, H. J. Gilbert, D. N. Bolam
Ligand-Mediated Dimerization Of A Carbohydrate -Binding Module Reveals A Novel Mechanism For Protein-Carbohydrate Recognition
J. Mol. Biol. V. 337 417 2004
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
1e: BETA-D-GLUCOSE (BGCe)
2a: ALPHA-D-GLUCOSE (GLCa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
5
Ligand/Ion
BETA-D-GLUCOSE
2
GLC
1
Ligand/Ion
ALPHA-D-GLUCOSE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:46 , BGC A:1146 , HOH A:2169 , HOH A:2171 , HOH A:2172 , TYR B:46
BINDING SITE FOR RESIDUE GLC A1145
2
AC2
SOFTWARE
TRP A:26 , GLN A:116 , GLC A:1145 , BGC A:1147 , HOH A:2173 , HOH A:2174 , TYR B:46 , HOH B:2081
BINDING SITE FOR RESIDUE BGC A1146
3
AC3
SOFTWARE
TRP A:26 , ARG A:78 , BGC A:1146 , BGC A:1148 , HOH A:2116 , HOH A:2173 , HOH A:2175 , HOH A:2176 , TRP B:26 , GLN B:116
BINDING SITE FOR RESIDUE BGC A1147
4
AC4
SOFTWARE
TRP A:24 , GLY A:25 , TRP A:26 , ARG A:112 , BGC A:1147 , BGC A:1149 , HOH A:2177 , HOH A:2178 , TRP B:26 , ARG B:78
BINDING SITE FOR RESIDUE BGC A1148
5
AC5
SOFTWARE
TRP A:24 , BGC A:1148 , BGC A:1150 , HOH A:2179 , HOH A:2180 , HOH A:2181 , TRP B:24 , GLY B:25 , TRP B:26 , ARG B:112
BINDING SITE FOR RESIDUE BGC A1149
6
AC6
SOFTWARE
ASP A:22 , TRP A:24 , BGC A:1149 , HOH A:2183 , HOH A:2184 , HOH A:2185 , HOH A:2186 , TRP B:24
BINDING SITE FOR RESIDUE BGC A1150
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1oh3a_ (A:)
1b: SCOP_d1oh3b_ (B:)
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Classes
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)
(
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(
)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Galactose-binding domain-like
(314)
Superfamily
:
Galactose-binding domain-like
(314)
Family
:
Family 29 carbohydrate binding module, CBM29
(10)
Protein domain
:
Non-catalytic protein 1, Ncp1
(4)
Piromyces equi [TaxId: 99929]
(4)
1a
d1oh3a_
A:
1b
d1oh3b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1oh3A00 (A:4-144)
1b: CATH_1oh3B00 (B:4-144)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.360, no name defined]
(15)
Piromyces equi. Organism_taxid: 99929.
(10)
1a
1oh3A00
A:4-144
1b
1oh3B00
B:4-144
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (59 KB)
Header - Asym.Unit
Biol.Unit 1 (29 KB)
Header - Biol.Unit 1
Biol.Unit 2 (26 KB)
Header - Biol.Unit 2
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