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Asym. Unit
Info
Asym.Unit (94 KB)
Biol.Unit 1 (89 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BACILLUS SUBTILIS COTA AFTER 1H SOAKING WITH EBS
Authors
:
F. J. Enguita, D. Marcal, R. Grenha, L. O. Martins, A. O. Henriques, M. A. Carrondo
Date
:
03 Apr 03 (Deposition) - 21 May 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.45
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Oxidase, Laccase, Endospore Coat, Reaction Cycle, Sporulation, Copper-Dependent
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
F. J. Enguita, D. Marcal, R. Grenha, L. O. Martins, A. O. Henriques, M. A. Carrondo
Structural Characterization Of A Bacterial Laccase Reaction Cycle
To Be Published
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Hetero Components
(5, 8)
Info
All Hetero Components
1a: CU-O LINKAGE (C1Oa)
2a: COPPER (I) ION (CU1a)
2b: COPPER (I) ION (CU1b)
2c: COPPER (I) ION (CU1c)
3a: 3-ETHYL-2-[(2Z)-2-(3-ETHYL-6-SULFO... (EBSa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
5a: OXYGEN MOLECULE (OXYa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
C1O
1
Ligand/Ion
CU-O LINKAGE
2
CU1
3
Ligand/Ion
COPPER (I) ION
3
EBS
1
Ligand/Ion
3-ETHYL-2-[(2Z)-2-(3-ETHYL-6-SULFO-1,3-BENZOTHIAZOL-2(3H)-YLIDENE)HYDRAZINO]-6-SULFO-3H-1,3-BENZOTHIAZOL-1-IUM
4
GOL
2
Ligand/Ion
GLYCEROL
5
OXY
1
Ligand/Ion
OXYGEN MOLECULE
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:419 , CYS A:492 , HIS A:497 , MET A:502
BINDING SITE FOR RESIDUE CU1 A1511
2
AC2
SOFTWARE
HIS A:107 , HIS A:153 , HIS A:493 , OXY A:1515
BINDING SITE FOR RESIDUE CU1 A1512
3
AC3
SOFTWARE
HIS A:155 , HIS A:422 , HIS A:424 , HIS A:491 , OXY A:1515
BINDING SITE FOR RESIDUE CU1 A1513
4
AC4
SOFTWARE
HIS A:105 , HIS A:107 , GLY A:108 , HIS A:422 , HIS A:424 , HOH A:2213 , HOH A:2235
BINDING SITE FOR RESIDUE C1O A1514
5
AC5
SOFTWARE
HIS A:153 , HIS A:155 , HIS A:491 , HIS A:493 , GLU A:498 , CU1 A:1512 , CU1 A:1513
BINDING SITE FOR RESIDUE OXY A1515
6
AC6
SOFTWARE
PRO A:226 , ALA A:227 , THR A:260 , GLY A:321 , CYS A:322 , GLY A:323 , LEU A:386 , THR A:415 , GLY A:417 , HIS A:419 , HIS A:497 , HOH A:2152 , HOH A:2238
BINDING SITE FOR RESIDUE EBS A1518
7
AC7
SOFTWARE
ASP A:113 , ASP A:114 , TYR A:118 , ALA A:121 , TYR A:133 , LYS A:135 , HOH A:2236
BINDING SITE FOR RESIDUE GOL A1516
8
AC8
SOFTWARE
ARG A:136 , GLU A:137 , VAL A:138 , PRO A:247 , THR A:307 , GLU A:310 , LEU A:343 , HOH A:2237
BINDING SITE FOR RESIDUE GOL A1517
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Sorry, no Info available
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1of0a1 (A:2-182)
1b: SCOP_d1of0a2 (A:183-356)
1c: SCOP_d1of0a3 (A:357-510)
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Protein Domains
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
Multidomain cupredoxins
(146)
Protein domain
:
Spore coat protein A, CotA
(9)
Bacillus subtilis [TaxId: 1423]
(9)
1a
d1of0a1
A:2-182
1b
d1of0a2
A:183-356
1c
d1of0a3
A:357-510
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1of0A03 (A:357-510)
1b: CATH_1of0A01 (A:2-175)
1c: CATH_1of0A02 (A:176-356)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Cupredoxins - blue copper proteins
(420)
Bacillus subtilis. Organism_taxid: 1423.
(7)
1a
1of0A03
A:357-510
1b
1of0A01
A:2-175
1c
1of0A02
A:176-356
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Pfam Domains
(3, 4)
Info
all PFAM domains
1a: PFAM_Cu_oxidase_1of0A01 (A:175-340)
2a: PFAM_Cu_oxidase_2_1of0A02 (A:358-511)
3a: PFAM_Cu_oxidase_3_1of0A03 (A:97-179)
3b: PFAM_Cu_oxidase_3_1of0A04 (A:97-179)
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Clan
:
CU_oxidase
(192)
Family
:
Cu-oxidase
(74)
Bacillus subtilis
(7)
1a
Cu-oxidase-1of0A01
A:175-340
Family
:
Cu-oxidase_2
(24)
Bacillus subtilis
(7)
2a
Cu-oxidase_2-1of0A02
A:358-511
Family
:
Cu-oxidase_3
(79)
Bacillus subtilis
(7)
3a
Cu-oxidase_3-1of0A03
A:97-179
3b
Cu-oxidase_3-1of0A04
A:97-179
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Chain A
Asymmetric Unit 1
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