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1O77
Asym. Unit
Info
Asym.Unit (124 KB)
Biol.Unit 1 (95 KB)
Biol.Unit 2 (26 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE C713S MUTANT OF THE TIR DOMAIN OF HUMAN TLR2
Authors
:
X. Tao, Y. Xu, Z. Ye, A. A. Beg, L. Tong
Date
:
24 Oct 02 (Deposition) - 21 Nov 02 (Release) - 09 Jun 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E (1x)
Keywords
:
Immune System/Membrane Protein, Known Biological Activity Receptor, Immune Response, Inflammatory Response, Signal, Transmembrane, Repeat, Leucine-Rich Repeat, Glycoprotein, 3D-Structure.
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Reference
:
X. Tao, Y. Xu, Y. Zheng, A. A. Beg, L. Tong
An Extensively Associated Dimer In The Structure Of The C713S Mutant Of The Tir Domain Of Human Tlr2
Biochem. Biophys. Res. Commun. V. 299 216 2002
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(3, 15)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_031236 (R677W, chain A/B/C/D/E, )
2: VAR_052360 (Y715N, chain A/B/C/D/E, )
3: VAR_031237 (R753Q, chain A/B/C/D/E, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_031236
R
677
W
TLR2_HUMAN
Polymorphism
---
A/B/C/D/E
R
677
W
2
UniProt
VAR_052360
Y
715
N
TLR2_HUMAN
Polymorphism
5743706
A/B/C/D/E
Y
715
N
3
UniProt
VAR_031237
R
753
Q
TLR2_HUMAN
Polymorphism
5743708
A/B/C/D/E
R
753
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 5)
Info
All PROSITE Patterns/Profiles
1: TIR (A:639-784,B:639-784,C:639-784,D:63...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TIR
PS50104
TIR domain profile.
TLR2_HUMAN
639-784
5
A:639-784
B:639-784
C:639-784
D:639-784
E:639-784
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Exons
(1, 5)
Info
All Exons
Exon 1.1 (A:639-784 (gaps) | B:639-784 (gaps...)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000260010
1
ENSE00000927464
chr4:
154624015-154627238
3224
TLR2_HUMAN
1-799
799
5
A:639-784 (gaps)
B:639-784 (gaps)
C:639-784 (gaps)
D:639-784 (gaps)
E:639-784 (gaps)
146
146
146
146
146
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SCOP Domains
(1, 5)
Info
All SCOP Domains
1a: SCOP_d1o77a_ (A:)
1b: SCOP_d1o77b_ (B:)
1c: SCOP_d1o77c_ (C:)
1d: SCOP_d1o77d_ (D:)
1e: SCOP_d1o77e_ (E:)
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Protein Domains
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
Toll/Interleukin receptor TIR domain
(9)
Family
:
Toll/Interleukin receptor TIR domain
(5)
Protein domain
:
Toll-like receptor 2, TLR2
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1o77a_
A:
1b
d1o77b_
B:
1c
d1o77c_
C:
1d
d1o77d_
D:
1e
d1o77e_
E:
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CATH Domains
(1, 5)
Info
all CATH domains
1a: CATH_1o77A00 (A:639-784)
1b: CATH_1o77D00 (D:639-784)
1c: CATH_1o77E00 (E:639-784)
1d: CATH_1o77B00 (B:639-784)
1e: CATH_1o77C00 (C:639-784)
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)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.10140, no name defined]
(8)
Human (Homo sapiens)
(8)
1a
1o77A00
A:639-784
1b
1o77D00
D:639-784
1c
1o77E00
E:639-784
1d
1o77B00
B:639-784
1e
1o77C00
C:639-784
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Pfam Domains
(1, 5)
Info
all PFAM domains
1a: PFAM_TIR_1o77E01 (E:643-781)
1b: PFAM_TIR_1o77E02 (E:643-781)
1c: PFAM_TIR_1o77E03 (E:643-781)
1d: PFAM_TIR_1o77E04 (E:643-781)
1e: PFAM_TIR_1o77E05 (E:643-781)
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Clan
:
STIR
(4)
Family
:
TIR
(4)
Homo sapiens (Human)
(3)
1a
TIR-1o77E01
E:643-781
1b
TIR-1o77E02
E:643-781
1c
TIR-1o77E03
E:643-781
1d
TIR-1o77E04
E:643-781
1e
TIR-1o77E05
E:643-781
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Asym.Unit (124 KB)
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