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1O71
Asym. Unit
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Asym.Unit (63 KB)
Biol.Unit 1 (31 KB)
Biol.Unit 2 (31 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE WATER-SOLUBLE STATE OF THE PORE-FORMING CYTOLYSIN STICHOLYSIN II COMPLEXED WITH GLYCEROL
Authors
:
J. M. Mancheno, M. Martinez-Ripoll, J. G. Gavilanes, J. A. Hermoso
Date
:
23 Oct 02 (Deposition) - 13 Nov 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.26
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cytolysin, Pore-Forming Toxin, Membrane Interaction, Hemolysis
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Mancheno, J. Martin-Benito, M. Martinez-Ripoll, J. G. Gavilanes, J. A. Hermoso
Crystal And Electron Microscopy Structures Of Sticholysin Ii Actinoporin Reveal Insights Into The Mechanism Of Membrane Pore Formation
Structure V. 11 1319 2003
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
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No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:111 , TYR A:136
BINDING SITE FOR RESIDUE GOL A1176
2
AC2
SOFTWARE
ARG A:29 , HOH A:2011 , HOH A:2072
BINDING SITE FOR RESIDUE GOL A1177
3
AC3
SOFTWARE
SER A:52 , THR A:82 , GLY A:83 , PRO A:105 , PHE A:106 , ASP A:107
BINDING SITE FOR RESIDUE GOL A1178
4
AC4
SOFTWARE
TYR B:111 , TYR B:136
BINDING SITE FOR RESIDUE GOL B1176
5
AC5
SOFTWARE
SER B:28 , ARG B:29 , PHE B:106 , HOH B:2067 , HOH B:2068 , HOH B:2069 , HOH B:2070
BINDING SITE FOR RESIDUE GOL B1177
6
AC6
SOFTWARE
SER B:52 , ALA B:81 , THR B:82 , GLY B:83 , PRO B:105 , PHE B:106 , ASP B:107
BINDING SITE FOR RESIDUE GOL B1178
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1o71a_ (A:)
1b: SCOP_d1o71b_ (B:)
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Cytolysin/lectin
(26)
Superfamily
:
Cytolysin/lectin
(26)
Family
:
Anemone pore-forming cytolysin
(9)
Protein domain
:
Sticholysin II
(5)
Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]
(5)
1a
d1o71a_
A:
1b
d1o71b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1o71A00 (A:1-175)
1b: CATH_1o71B00 (B:1-175)
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Mutm (Fpg) Protein; Chain: A, domain 2
(18)
Homologous Superfamily
:
[code=2.60.270.20, no name defined]
(18)
Carribean sea anemone (Stoichactis helianthus)
(3)
1a
1o71A00
A:1-175
1b
1o71B00
B:1-175
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Pfam Domains
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