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1NVG
Asym. Unit
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Asym.Unit (61 KB)
Biol.Unit 1 (220 KB)
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(1)
Title
:
N249Y MUTANT OF THE ALCOHOL DEHYDROGENASE FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS-TETRAGONAL CRYSTAL FORM
Authors
:
L. Esposito, I. Bruno, F. Sica, C. A. Raia, A. Giordano, M. Rossi, L. Mazzarella, A. Zagari
Date
:
03 Feb 03 (Deposition) - 26 Aug 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Archaeon, Zinc, Nad(H) Dependent, Mutant, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Esposito, I. Bruno, F. Sica, C. A. Raia, A. Giordano, M. Rossi, L. Mazzarella, A. Zagari
Structural Study Of A Single-Point Mutant Of Sulfolobus Solfataricus Alcohol Dehydrogenase With Enhanced Activity
Febs Lett. V. 539 14 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
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Label:
No.
Name
Count
Type
Full Name
1
ZN
2
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: ZNC (AUTHOR)
4: ZNS (AUTHOR)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:98 , CYS A:101 , CYS A:104 , CYS A:112
BINDING SITE FOR RESIDUE ZN A 400
2
AC2
SOFTWARE
CYS A:38 , HIS A:68 , GLU A:69 , CYS A:154
BINDING SITE FOR RESIDUE ZN A 500
3
ZNC
AUTHOR
CYS A:38 , CYS A:154 , GLU A:69 , HIS A:68
RESIDUES THAT BIND THE CATALYTIC ZINC ION (ZN A 500)
4
ZNS
AUTHOR
CYS A:112 , GLU A:98 , CYS A:101 , CYS A:104
RESIDUES THAT BIND THE CATALYTIC ZINC ION (ZN A 500)
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ADH_ZINC (A:67-81)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ADH_ZINC
PS00059
Zinc-containing alcohol dehydrogenases signature.
ADH_SULSO
67-81
1
A:67-81
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1nvga1 (A:1-143,A:314-347)
2a: SCOP_d1nvga2 (A:144-313)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
GroES-like
(132)
Superfamily
:
GroES-like
(130)
Family
:
Alcohol dehydrogenase-like, N-terminal domain
(114)
Protein domain
:
Alcohol dehydrogenase
(77)
Sulfolobus solfataricus [TaxId: 2287]
(4)
1a
d1nvga1
A:1-143,A:314-347
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Alcohol dehydrogenase-like, C-terminal domain
(115)
Protein domain
:
Alcohol dehydrogenase
(77)
Sulfolobus solfataricus [TaxId: 2287]
(4)
2a
d1nvga2
A:144-313
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1nvgA02 (A:159-295)
2a: CATH_1nvgA01 (A:1-158,A:296-347)
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)
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)
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)
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)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
NAD(P)-binding Rossmann-like Domain
(1244)
Sulfolobus solfataricus. Organism_taxid: 2287.
(6)
1a
1nvgA02
A:159-295
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Quinone Oxidoreductase; Chain A, domain 1
(131)
Homologous Superfamily
:
Medium-chain alcohol dehydrogenases, catalytic domain
(131)
Sulfolobus solfataricus. Organism_taxid: 2287.
(5)
2a
1nvgA01
A:1-158,A:296-347
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_ADH_N_1nvgA01 (A:25-141)
2a: PFAM_ADH_zinc_N_1nvgA02 (A:182-311)
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Clans
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Families
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)
(
)
Organisms
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)
(
)
Clan
:
GroES
(70)
Family
:
ADH_N
(62)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(3)
1a
ADH_N-1nvgA01
A:25-141
Clan
:
NADP_Rossmann
(1239)
Family
:
ADH_zinc_N
(75)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(3)
2a
ADH_zinc_N-1nvgA02
A:182-311
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Asymmetric Unit 1
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