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1NIW
Biol. Unit 3
Info
Asym.Unit (123 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (31 KB)
Biol.Unit 3 (32 KB)
Biol.Unit 4 (32 KB)
Biol.Unit 5 (113 KB)
Biol.Unit 6 (114 KB)
Biol.Unit 7 (59 KB)
Biol.Unit 8 (59 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ENDOTHELIAL NITRIC OXIDE SYNTHASE PEPTIDE BOUND TO CALMODULIN
Authors
:
M. Aoyagi, A. S. Arvai, J. A. Tainer, E. D. Getzoff
Date
:
26 Dec 02 (Deposition) - 18 Feb 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: A,B,C,D,E,F,G,H (1x)
Biol. Unit 6: A,B,C,D,E,F,G,H (1x)
Biol. Unit 7: C,D,G,H (1x)
Biol. Unit 8: A,B,E,F (1x)
Keywords
:
Nitric Oxide, Calcium-Binding Protein, Nos, Signaling Protein/Oxidoreductase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Aoyagi, A. S. Arvai, J. A. Tainer, E. D. Getzoff
Structural Basis For Endothelial Nitric Oxide Synthase Binding To Calmodulin
Embo J. V. 22 766 2003
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 11)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
1o: CALCIUM ION (CAo)
1p: CALCIUM ION (CAp)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
3a: SELENOMETHIONINE (MSEa)
3aa: SELENOMETHIONINE (MSEaa)
3ab: SELENOMETHIONINE (MSEab)
3ac: SELENOMETHIONINE (MSEac)
3ad: SELENOMETHIONINE (MSEad)
3ae: SELENOMETHIONINE (MSEae)
3af: SELENOMETHIONINE (MSEaf)
3ag: SELENOMETHIONINE (MSEag)
3ah: SELENOMETHIONINE (MSEah)
3ai: SELENOMETHIONINE (MSEai)
3aj: SELENOMETHIONINE (MSEaj)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
3r: SELENOMETHIONINE (MSEr)
3s: SELENOMETHIONINE (MSEs)
3t: SELENOMETHIONINE (MSEt)
3u: SELENOMETHIONINE (MSEu)
3v: SELENOMETHIONINE (MSEv)
3w: SELENOMETHIONINE (MSEw)
3x: SELENOMETHIONINE (MSEx)
3y: SELENOMETHIONINE (MSEy)
3z: SELENOMETHIONINE (MSEz)
4a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
MSE
9
Mod. Amino Acid
SELENOMETHIONINE
4
SO4
-1
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(7, 7)
Info
All Sites
1: AC9 (SOFTWARE)
2: BC1 (SOFTWARE)
3: BC2 (SOFTWARE)
4: BC3 (SOFTWARE)
5: BC4 (SOFTWARE)
6: CC2 (SOFTWARE)
7: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC9
SOFTWARE
ASP E:20 , ASP E:22 , ASP E:24 , THR E:26 , GLU E:31 , HOH E:3031
BINDING SITE FOR RESIDUE CA E 1009
2
BC1
SOFTWARE
ASP E:56 , ASP E:58 , ASN E:60 , THR E:62 , GLU E:67
BINDING SITE FOR RESIDUE CA E 1010
3
BC2
SOFTWARE
ASP E:93 , ASP E:95 , ASN E:97 , TYR E:99 , GLU E:104 , HOH E:3033
BINDING SITE FOR RESIDUE CA E 1011
4
BC3
SOFTWARE
ASP E:129 , ASP E:131 , ASP E:133 , GLN E:135 , GLU E:140 , HOH E:3044
BINDING SITE FOR RESIDUE CA E 1012
5
BC4
SOFTWARE
SER A:101 , ALA A:103 , GLU A:104 , HOH A:3171 , ALA E:102 , ARG E:106
BINDING SITE FOR RESIDUE SO4 A 4001
6
CC2
SOFTWARE
LEU E:39 , GLU E:87 , ARG E:90
BINDING SITE FOR RESIDUE EDO E 5003
7
CC3
SOFTWARE
GLY E:98 , TYR E:99 , ASN E:137 , TYR E:138 , HOH E:3154
BINDING SITE FOR RESIDUE EDO E 5004
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(2, 24)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (E:7-42,E:43-78,E:80-115,E:116-147)
2: EF_HAND_1 (E:20-32,E:56-68,E:93-105,E:129-141)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM3_RAT
8-43
44-79
81-116
117-149
4
-
-
E:7-42
-
-
-
E:43-78
-
-
-
E:80-115
-
-
-
E:116-147
-
CALM1_RAT
8-43
44-79
81-116
117-149
4
-
-
E:7-42
-
-
-
E:43-78
-
-
-
E:80-115
-
-
-
E:116-147
-
CALM2_RAT
8-43
44-79
81-116
117-149
4
-
-
E:7-42
-
-
-
E:43-78
-
-
-
E:80-115
-
-
-
E:116-147
-
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM3_RAT
21-33
57-69
94-106
130-142
4
-
-
E:20-32
-
-
-
E:56-68
-
-
-
E:93-105
-
-
-
E:129-141
-
CALM1_RAT
21-33
57-69
94-106
130-142
4
-
-
E:20-32
-
-
-
E:56-68
-
-
-
E:93-105
-
-
-
E:129-141
-
CALM2_RAT
21-33
57-69
94-106
130-142
4
-
-
E:20-32
-
-
-
E:56-68
-
-
-
E:93-105
-
-
-
E:129-141
-
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1niwa_ (A:)
1b: SCOP_d1niwc_ (C:)
1c: SCOP_d1niwe_ (E:)
1d: SCOP_d1niwg_ (G:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(15)
1a
d1niwa_
A:
1b
d1niwc_
C:
1c
d1niwe_
E:
1d
d1niwg_
G:
[
close SCOP info
]
CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1niwA01 (A:5-78)
1b: CATH_1niwC01 (C:5-78)
1c: CATH_1niwE01 (E:5-78)
1d: CATH_1niwG01 (G:5-78)
1e: CATH_1niwA02 (A:79-139)
1f: CATH_1niwC02 (C:79-139)
1g: CATH_1niwE02 (E:79-139)
1h: CATH_1niwG02 (G:79-139)
View:
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Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Norway rat (Rattus norvegicus)
(37)
1a
1niwA01
A:5-78
1b
1niwC01
C:5-78
1c
1niwE01
E:5-78
1d
1niwG01
G:5-78
1e
1niwA02
A:79-139
1f
1niwC02
C:79-139
1g
1niwE02
E:79-139
1h
1niwG02
G:79-139
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Protein & NOT Site
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Asymmetric Unit 1
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