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1NHV
Biol. Unit 1
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Asym.Unit (183 KB)
Biol.Unit 1 (91 KB)
Biol.Unit 2 (92 KB)
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(1)
Title
:
HEPATITIS C VIRUS RNA POLYMERASE IN COMPLEX WITH NON-NUCLEOSIDE ANALOGUE INHIBITOR
Authors
:
M. Wang, K. K. S. Ng, M. M. Cherney, L. Chan, C. G. Yannopoulos, J. Bedard, N. Morin, N. Nguyen-Ba, M. H. Alaoui-Ismaili, R. C. Bethell, M. N. G. James
Date
:
19 Dec 02 (Deposition) - 18 Mar 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hepatitis C; Rna Polymerase; Enzyme Inhibition, X-Ray Crystallography, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Wang, K. K. S. Ng, M. M. Cherney, L. Chan, C. G. Yannopoulos, J. Bedard, N. Morin, N. Nguyen-Ba, M. H. Alaoui-Ismaili, R. C. Bethell, M. N. G. James
Non-Nucleoside Analogue Inhibitors Bind To An Allosteric Site On Hcv Ns5B Polymerase: Crystal Structures And Mechanism Of Inhibition
J. Biol. Chem. V. 278 9489 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: (2S)-2-[(5-BENZOFURAN-2-YL-THIOPHE... (154a)
1b: (2S)-2-[(5-BENZOFURAN-2-YL-THIOPHE... (154b)
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No.
Name
Count
Type
Full Name
1
154
1
Ligand/Ion
(2S)-2-[(5-BENZOFURAN-2-YL-THIOPHEN-2-YLMETHYL)-(2,4-DICHLORO-BENZOYL)-AMINO]-3-PHENYL-PROPIONIC ACID
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:422 , MET A:423 , LEU A:474 , SER A:476 , TYR A:477 , ARG A:501 , TRP A:528
BINDING SITE FOR RESIDUE 154 A 5001
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(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
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1: RDRP_SSRNA_POS (A:214-332)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RDRP_SSRNA_POS
PS50507
RdRp of positive ssRNA viruses catalytic domain profile.
POLG_HCVBK
2633-2751
1
A:214-332
-
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Exons
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SCOP Domains
(1, 2)
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1a: SCOP_d1nhva_ (A:)
1b: SCOP_d1nhvb_ (B:)
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
DNA/RNA polymerases
(850)
Superfamily
:
DNA/RNA polymerases
(850)
Family
:
RNA-dependent RNA-polymerase
(253)
Protein domain
:
Viral RNA polymerase
(148)
Hepatitis C virus [TaxId: 11103]
(72)
1a
d1nhva_
A:
1b
d1nhvb_
B:
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Pfam Domains
(1, 2)
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all PFAM domains
1a: PFAM_RdRP_3_1nhvB01 (B:3-514)
1b: PFAM_RdRP_3_1nhvB02 (B:3-514)
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Clan
:
RdRP
(210)
Family
:
RdRP_3
(43)
Hepatitis C virus genotype 1b (isolate BK) (HCV)
(10)
1a
RdRP_3-1nhvB01
B:3-514
1b
RdRP_3-1nhvB02
B:3-514
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (183 KB)
Header - Asym.Unit
Biol.Unit 1 (91 KB)
Header - Biol.Unit 1
Biol.Unit 2 (92 KB)
Header - Biol.Unit 2
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