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1NHJ
Biol. Unit 1
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Asym.Unit (64 KB)
Biol.Unit 1 (116 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF N-TERMINAL 40KD MUTL/A100P MUTANT PROTEIN COMPLEX WITH ADPNP AND ONE SODIUM
Authors
:
X. Hu, M. Machius, W. Yang
Date
:
19 Dec 02 (Deposition) - 10 Jun 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Dna Mismatch Repair, Mutl, Atpase, Rubidium, Replication, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Hu, M. Machius, W. Yang
Monovalent Cation Dependence And Preference Of Ghkl Atpases And Kinases
Febs Lett. V. 544 268 2003
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
2a: MAGNESIUM ION (MGa)
3a: SODIUM ION (NAa)
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No.
Name
Count
Type
Full Name
1
ANP
2
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
NA
-1
Ligand/Ion
SODIUM ION
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Sites
(3, 3)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:71 , ALA A:73 , ALA A:76 , GLY A:96 , PRO A:100 , ANP A:380
BINDING SITE FOR RESIDUE NA A 390
2
AC2
SOFTWARE
ASN A:33 , ANP A:380 , HOH A:402 , HOH A:436
BINDING SITE FOR RESIDUE MG A 370
3
AC3
SOFTWARE
ILE A:3 , GLU A:29 , ASN A:33 , ALA A:37 , ASP A:58 , GLY A:62 , ILE A:63 , ALA A:71 , THR A:77 , SER A:78 , LYS A:79 , GLY A:93 , PHE A:94 , ARG A:95 , GLY A:96 , GLU A:97 , ALA A:98 , LEU A:99 , PRO A:100 , THR A:143 , LYS A:307 , MG A:370 , NA A:390 , HOH A:397 , HOH A:435 , HOH A:437 , HOH A:446 , HOH A:516
BINDING SITE FOR RESIDUE ANP A 380
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: DNA_MISMATCH_REPAIR_1 (A:93-99)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DNA_MISMATCH_REPAIR_1
PS00058
DNA mismatch repair proteins mutL / hexB / PMS1 signature.
MUTL_ECO57
93-99
2
A:93-99
MUTL_ECOLI
93-99
2
A:93-99
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1nhja2 (A:-2-216)
2a: SCOP_d1nhja1 (A:217-331)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
DNA gyrase/MutL, N-terminal domain
(28)
Protein domain
:
DNA mismatch repair protein MutL
(6)
Escherichia coli [TaxId: 562]
(6)
1a
d1nhja2
A:-2-216
Fold
:
Ribosomal protein S5 domain 2-like
(306)
Superfamily
:
Ribosomal protein S5 domain 2-like
(306)
Family
:
DNA gyrase/MutL, second domain
(21)
Protein domain
:
DNA mismatch repair protein MutL
(6)
Escherichia coli [TaxId: 562]
(6)
2a
d1nhja1
A:217-331
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1nhjA01 (A:1-216)
2a: CATH_1nhjA02 (A:217-330)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Heat Shock Protein 90
(209)
Homologous Superfamily
:
[code=3.30.565.10, no name defined]
(205)
Escherichia coli k12. Organism_taxid: 83333. Strain: k-12.
(6)
1a
1nhjA01
A:1-216
Topology
:
Ribosomal Protein S5; domain 2
(189)
Homologous Superfamily
:
[code=3.30.230.10, no name defined]
(170)
Escherichia coli k12. Organism_taxid: 83333. Strain: k-12.
(6)
2a
1nhjA02
A:217-330
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_HATPase_c_3_1nhjA01 (A:21-142)
2a: PFAM_DNA_mis_repair_1nhjA02 (A:212-331)
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Clans
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Clan
:
His_Kinase_A
(147)
Family
:
HATPase_c_3
(11)
Escherichia coli (strain K12)
(3)
1a
HATPase_c_3-1nhjA01
A:21-142
Clan
:
S5
(103)
Family
:
DNA_mis_repair
(3)
Escherichia coli (strain K12)
(3)
2a
DNA_mis_repair-1nhjA02
A:212-331
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