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1NDS
Biol. Unit 1
Info
Asym.Unit (37 KB)
Biol.Unit 1 (10 KB)
Biol.Unit 2 (10 KB)
Biol.Unit 3 (11 KB)
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(1)
Title
:
CRYSTALLOGRAPHIC STRUCTURE OF A SUBSTRATE BOUND BLUE COPPER NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS
Authors
:
F. E. Dodd, S. S. Hasnain, Z. H. L. Abraham, R. R. Eady, B. E. Smith
Date
:
23 Jan 97 (Deposition) - 07 Jul 97 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Blue Copper Nitrite Reductase, Copper Protein, Nitrite Reduction, Reductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. E. Dodd, S. S. Hasnain, Z. H. Abraham, R. R. Eady, B. E. Smith
Structures Of A Blue-Copper Nitrite Reductase And Its Substrate-Bound Complex.
Acta Crystallogr. , Sect. D V. 53 406 1997
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
2a: NITRITE ION (NO2a)
2b: NITRITE ION (NO2b)
2c: NITRITE ION (NO2c)
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No.
Name
Count
Type
Full Name
1
CU
-1
Ligand/Ion
COPPER (II) ION
2
NO2
1
Ligand/Ion
NITRITE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (UNKNOWN)
2: AC2 (UNKNOWN)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AD1 (SOFTWARE)
7: AD2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
UNKNOWN
HIS A:95 , CYS A:136 , HIS A:145 , MET A:150
MONOMER A TYPE 1 COPPER SITE.
2
AC2
UNKNOWN
HIS A:100 , HIS A:135 , HIS A:306 , NO2 A:503
MONOMER A TYPE 2 COPPER SITE.
3
AC3
SOFTWARE
HIS A:95 , CYS A:136 , HIS A:145 , MET A:150
BINDING SITE FOR RESIDUE CU A 501
4
AC4
SOFTWARE
HIS A:100 , HIS A:135 , NO2 A:503 , HIS B:306
BINDING SITE FOR RESIDUE CU A 502
5
AC5
SOFTWARE
HIS A:100 , HIS A:135 , CU A:502 , HIS B:306
BINDING SITE FOR RESIDUE NO2 A 503
6
AD1
SOFTWARE
HIS A:306 , HIS C:100 , HIS C:135 , NO2 C:503
BINDING SITE FOR RESIDUE CU C 502
7
AD2
SOFTWARE
HIS A:306 , HIS C:100 , HIS C:135 , CU C:502
BINDING SITE FOR RESIDUE NO2 C 503
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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Exons
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1ndsa1 (A:11-166)
1b: SCOP_d1ndsa2 (A:167-340)
1c: SCOP_d1ndsb1 (B:11-166)
1d: SCOP_d1ndsb2 (B:167-340)
1e: SCOP_d1ndsc1 (C:11-166)
1f: SCOP_d1ndsc2 (C:167-340)
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Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
Multidomain cupredoxins
(146)
Protein domain
:
Nitrite reductase, NIR
(79)
Alcaligenes xylosoxidans [TaxId: 85698]
(23)
1a
d1ndsa1
A:11-166
1b
d1ndsa2
A:167-340
1c
d1ndsb1
B:11-166
1d
d1ndsb2
B:167-340
1e
d1ndsc1
C:11-166
1f
d1ndsc2
C:167-340
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (37 KB)
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