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1ND7
Asym. Unit
Info
Asym.Unit (69 KB)
Biol.Unit 1 (64 KB)
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(1)
Title
:
CONFORMATIONAL FLEXIBILITY UNDERLIES UBIQUITIN LIGATION MEDIATED BY THE WWP1 HECT DOMAIN E3 LIGASE
Authors
:
M. A. Verdecia, C. A. P. Joaziero, N. J. Wells, J. -L. Ferrer, M. E. Bowman, T. Hunter, J. P. Noel
Date
:
08 Dec 02 (Deposition) - 23 Sep 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hect, Ubiquitin, Ligase, E3, Wwp1
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. A. Verdecia, C. A. P. Joaziero, N. J. Wells, J. -L. Ferrer, M. E. Bowman, T. Hunter, J. P. Noel
Conformational Flexibility Underlies Ubiquitin Ligation Mediated By The Wwp1 Hect Domain E3 Ligase
Mol. Cell V. 11 249 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_052960 (G852V, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_052960
G
852
V
WWP1_HUMAN
Polymorphism
1059901
A
G
852
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: HECT (A:588-917)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HECT
PS50237
HECT domain profile.
WWP1_HUMAN
588-922
1
A:588-917
[
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Exons
(11, 11)
Info
All Exons
Exon 1.18a (A:544-559)
Exon 1.19b (A:560-583)
Exon 1.20 (A:584-613)
Exon 1.22b (A:613-666)
Exon 1.23a (A:667-711)
Exon 1.23d (A:711-758)
Exon 1.24c (A:758-798)
Exon 1.25a (A:799-833)
Exon 1.26a (A:834-866)
Exon 1.27 (A:866-890)
Exon 1.28a (A:890-917)
View:
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All Exon Boundaries
01: Boundary 1.17b/1.18a
02: Boundary 1.18a/1.19b
03: Boundary 1.19b/1.20
04: Boundary 1.20/1.22b
05: Boundary 1.22b/1.23a
06: Boundary 1.23a/1.23d
07: Boundary 1.23d/1.24c
08: Boundary 1.24c/1.25a
09: Boundary 1.25a/1.26a
10: Boundary 1.26a/1.27
11: Boundary 1.27/1.28a
12: Boundary 1.28a/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3b
ENST00000265428
3b
ENSE00001370116
chr8:
87386270-87386349
80
WWP1_HUMAN
1-24
24
0
-
-
1.4a
ENST00000265428
4a
ENSE00001019038
chr8:
87392955-87393093
139
WWP1_HUMAN
24-70
47
0
-
-
1.5
ENST00000265428
5
ENSE00001019041
chr8:
87393734-87393858
125
WWP1_HUMAN
70-112
43
0
-
-
1.7
ENST00000265428
7
ENSE00001019046
chr8:
87410571-87410708
138
WWP1_HUMAN
112-158
47
0
-
-
1.8
ENST00000265428
8
ENSE00001019044
chr8:
87410801-87410867
67
WWP1_HUMAN
158-180
23
0
-
-
1.9
ENST00000265428
9
ENSE00001019043
chr8:
87414248-87414432
185
WWP1_HUMAN
180-242
63
0
-
-
1.11
ENST00000265428
11
ENSE00001718962
chr8:
87423767-87424103
337
WWP1_HUMAN
242-354
113
0
-
-
1.13
ENST00000265428
13
ENSE00001754335
chr8:
87437452-87437547
96
WWP1_HUMAN
354-386
33
0
-
-
1.14
ENST00000265428
14
ENSE00001672699
chr8:
87439872-87440046
175
WWP1_HUMAN
386-444
59
0
-
-
1.15b
ENST00000265428
15b
ENSE00001773927
chr8:
87442926-87442980
55
WWP1_HUMAN
445-463
19
0
-
-
1.16
ENST00000265428
16
ENSE00001663350
chr8:
87443635-87443719
85
WWP1_HUMAN
463-491
29
0
-
-
1.17b
ENST00000265428
17b
ENSE00001693879
chr8:
87443844-87443972
129
WWP1_HUMAN
491-534
44
0
-
-
1.18a
ENST00000265428
18a
ENSE00001740886
chr8:
87447681-87447756
76
WWP1_HUMAN
534-559
26
1
A:544-559
16
1.19b
ENST00000265428
19b
ENSE00001749242
chr8:
87447862-87447933
72
WWP1_HUMAN
560-583
24
1
A:560-583
24
1.20
ENST00000265428
20
ENSE00001635252
chr8:
87450814-87450902
89
WWP1_HUMAN
584-613
30
1
A:584-613
30
1.22b
ENST00000265428
22b
ENSE00001692056
chr8:
87454848-87455007
160
WWP1_HUMAN
613-666
54
1
A:613-666
54
1.23a
ENST00000265428
23a
ENSE00001261252
chr8:
87460377-87460510
134
WWP1_HUMAN
667-711
45
1
A:667-711
45
1.23d
ENST00000265428
23d
ENSE00001261248
chr8:
87460602-87460742
141
WWP1_HUMAN
711-758
48
1
A:711-758
48
1.24c
ENST00000265428
24c
ENSE00001261241
chr8:
87464788-87464908
121
WWP1_HUMAN
758-798
41
1
A:758-798
41
1.25a
ENST00000265428
25a
ENSE00001261235
chr8:
87470150-87470254
105
WWP1_HUMAN
799-833
35
1
A:799-833
35
1.26a
ENST00000265428
26a
ENSE00001261227
chr8:
87473453-87473549
97
WWP1_HUMAN
834-866
33
1
A:834-866
33
1.27
ENST00000265428
27
ENSE00001666690
chr8:
87474003-87474075
73
WWP1_HUMAN
866-890
25
1
A:866-890
25
1.28a
ENST00000265428
28a
ENSE00001048937
chr8:
87479023-87479705
683
WWP1_HUMAN
890-922
33
1
A:890-917
28
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1nd7a_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Hect, E3 ligase catalytic domain
(12)
Superfamily
:
Hect, E3 ligase catalytic domain
(12)
Family
:
Hect, E3 ligase catalytic domain
(4)
Protein domain
:
WW domain-containing protein 1, WWP1
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1nd7a_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_HECT_1nd7A01 (A:617-917)
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Clans
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(
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(
)
Clan
:
no clan defined [family: HECT]
(8)
Family
:
HECT
(8)
Homo sapiens (Human)
(7)
1a
HECT-1nd7A01
A:617-917
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