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Getting 'Biological Unit' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1NCX
Asym. Unit
Info
Asym.Unit (35 KB)
Biol.Unit 1 (31 KB)
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(1)
Title
:
TROPONIN C
Authors
:
M. Sundaralingam, S. T. Rao
Date
:
02 Jun 96 (Deposition) - 07 Dec 96 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Muscle Protein, Calcium-Binding Protein, Duplication
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. T. Rao, K. A. Satyshur, M. L. Greaser, M. Sundaralingam
X-Ray Structures Of Mn, Cd And Tb Metal Complexes Of Troponin C.
Acta Crystallogr. , Sect. D V. 52 916 1996
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: CADMIUM ION (CDa)
1b: CADMIUM ION (CDb)
2a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CD
2
Ligand/Ion
CADMIUM ION
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:106 , ASN A:108 , ASP A:110 , PHE A:112 , GLU A:117 , HOH A:176
BINDING SITE FOR RESIDUE CD A 163
2
AC2
SOFTWARE
ASP A:142 , ASN A:144 , ASP A:146 , ARG A:148 , GLU A:153 , HOH A:209
BINDING SITE FOR RESIDUE CD A 164
3
AC3
SOFTWARE
GLY A:43 , THR A:44 , ARG A:47 , LYS A:55 , HOH A:234 , HOH A:306 , HOH A:325
BINDING SITE FOR RESIDUE SO4 A 225
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:17-52|A:53-88|A:93-128|A:129-162)
2: EF_HAND_1 (A:30-42|A:66-78|A:106-118|A:142-15...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
TNNC2_CHICK
18-53
54-89
94-129
130-163
4
A:17-52
A:53-88
A:93-128
A:129-162
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
TNNC2_CHICK
31-43
67-79
107-119
143-155
4
A:30-42
A:66-78
A:106-118
A:142-154
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Exons
(4, 4)
Info
All Exons
Exon 1.1 (A:1-49)
Exon 1.2 (A:49-87)
Exon 1.3 (A:87-133)
Exon 1.4 (A:133-142)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSGALT00000011060
1
ENSGALE00000073521
Un_random:20732110-20732258
149
TNNC2_CHICK
1-50
50
1
A:1-49
49
1.2
ENSGALT00000011060
2
ENSGALE00000073519
Un_random:20732332-20732446
115
TNNC2_CHICK
50-88
39
1
A:49-87
39
1.3
ENSGALT00000011060
3
ENSGALE00000073522
Un_random:20732522-20732658
137
TNNC2_CHICK
88-134
47
1
A:87-133
47
1.4
ENSGALT00000011060
4
ENSGALE00000073520
Un_random:20732749-20732979
231
TNNC2_CHICK
134-143
10
1
A:133-142
10
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ncxa_ (A:)
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(
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)
Folds
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)
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)
Superfamilies
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Troponin C
(53)
Chicken (Gallus gallus) [TaxId: 9031]
(28)
1a
d1ncxa_
A:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1ncxA01 (A:1-90)
1b: CATH_1ncxA02 (A:91-162)
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)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Chicken (Gallus gallus)
(34)
1a
1ncxA01
A:1-90
1b
1ncxA02
A:91-162
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
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Protein
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All Atoms
Protein & NOT Variant
Protein & NOT Site
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Chain A
Asymmetric Unit 1
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