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1NA0
Biol. Unit 2
Info
Asym.Unit (51 KB)
Biol.Unit 1 (23 KB)
Biol.Unit 2 (24 KB)
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(1)
Title
:
DESIGN OF STABLE ALPHA-HELICAL ARRAYS FROM AN IDEALIZED TPR MOTIF
Authors
:
E. Main, Y. Xiong, M. Cocco, L. D'Andrea, L. Regan
Date
:
26 Nov 02 (Deposition) - 03 Jun 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Design, Tpr, De Novo Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Main, Y. Xiong, M. Cocco, L. D'Andrea, L. Regan
Design Of Stable Alpha-Helical Arrays From An Idealized Tpr Motif
Structure V. 11 497 2003
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: CHLORIDE ION (CLa)
3a: ISOPROPYL-1-BETA-D-THIOGALACTOSIDE (IPTa)
3b: ISOPROPYL-1-BETA-D-THIOGALACTOSIDE (IPTb)
4a: MAGNESIUM ION (MGa)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
6a: LEAD (II) ION (PBa)
6b: LEAD (II) ION (PBb)
6c: LEAD (II) ION (PBc)
6d: LEAD (II) ION (PBd)
6e: LEAD (II) ION (PBe)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
IPT
2
Ligand/Ion
ISOPROPYL-1-BETA-D-THIOGALACTOSIDE
4
MG
-1
Ligand/Ion
MAGNESIUM ION
5
NA
-1
Ligand/Ion
SODIUM ION
6
PB
-1
Ligand/Ion
LEAD (II) ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC7 (SOFTWARE)
06: AC8 (SOFTWARE)
07: AC9 (SOFTWARE)
08: BC1 (SOFTWARE)
09: BC2 (SOFTWARE)
10: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH A:358 , ASN B:51 , ASN B:82 , HOH B:347
BINDING SITE FOR RESIDUE ACT B 207
02
AC2
SOFTWARE
GLU A:30 , GLU B:30
BINDING SITE FOR RESIDUE PB B 274
03
AC4
SOFTWARE
GLU B:95
BINDING SITE FOR RESIDUE PB B 276
04
AC5
SOFTWARE
GLN B:56 , ASP B:58
BINDING SITE FOR RESIDUE PB B 277
05
AC7
SOFTWARE
LYS A:89 , LYS B:89 , HOH B:434
BINDING SITE FOR RESIDUE CL B 300
06
AC8
SOFTWARE
HOH A:344 , HOH B:316 , HOH B:321 , HOH B:434
BINDING SITE FOR RESIDUE NA B 320
07
AC9
SOFTWARE
ASP A:60 , HOH A:387 , HOH A:453 , HOH B:455 , HOH B:472
BINDING SITE FOR RESIDUE MG B 386
08
BC1
SOFTWARE
IPT B:206 , HOH B:308 , HOH B:311 , HOH B:321 , HOH B:333
BINDING SITE FOR RESIDUE NA B 435
09
BC2
SOFTWARE
ASN A:85 , TYR A:88 , LYS A:89 , ASN A:116 , HOH A:330 , TYR B:54 , LYS B:55 , GLY B:57 , TYR B:59 , HOH B:316 , HOH B:444
BINDING SITE FOR RESIDUE IPT B 200
10
BC3
SOFTWARE
TYR A:54 , LYS A:55 , GLY A:57 , TYR A:59 , TYR B:54 , ASN B:85 , TYR B:88 , LYS B:89 , ASN B:116 , HOH B:311 , HOH B:360 , HOH B:380 , NA B:435
BINDING SITE FOR RESIDUE IPT B 206
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1na0a_ (A:)
1b: SCOP_d1na0b_ (B:)
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Protein Domains
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(
)
Organisms
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(
)
Class
:
Designed proteins
(167)
Fold
:
TPR domain-based design
(4)
Superfamily
:
TPR domain-based design
(4)
Family
:
TPR domain-based design
(4)
Protein domain
:
Designed protein cTPR3
(1)
Synthetic
(1)
1a
d1na0a_
A:
1b
d1na0b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1na0A00 (A:7-125)
1b: CATH_1na0B00 (B:7-125)
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Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.10, no name defined]
(42)
Unidentified. Organism_taxid: 32644.
(2)
1a
1na0A00
A:7-125
1b
1na0B00
B:7-125
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Pfam Domains
(0, 0)
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (51 KB)
Header - Asym.Unit
Biol.Unit 1 (23 KB)
Header - Biol.Unit 1
Biol.Unit 2 (24 KB)
Header - Biol.Unit 2
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