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Getting 'Biological Unit' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1N9Z
Asym. Unit
Info
Asym.Unit (36 KB)
Biol.Unit 1 (31 KB)
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(1)
Title
:
INTEGRIN ALPHA M I DOMAIN MUTANT
Authors
:
C. J. Mccleverty, R. C. Liddington
Date
:
26 Nov 02 (Deposition) - 20 May 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Rossmann Fold, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. J. Mccleverty, R. C. Liddington
Engineered Allosteric Mutants Of The Integrin Alphambeta2 I Domain: Structural And Functional Studies
Biochem. J. V. 372 121 2003
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 1)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
1
Ligand/Ion
MAGNESIUM ION
[
close Hetero Component info
]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:139 , LYS A:154 , LEU A:173 , ILE A:202
BINDING SITE FOR RESIDUE MG A 400
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: VWFA (A:134-312)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
VWFA
PS50234
VWFA domain profile.
ITAM_HUMAN
150-328
1
A:134-312
[
close PROSITE info
]
Exons
(4, 4)
Info
All Exons
Exon 1.6 (A:132-170 (gaps))
Exon 1.7 (A:171-219)
Exon 1.8 (A:219-270)
Exon 1.9 (A:271-315)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
5: Boundary 1.9/1.10
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000287497
1
ENSE00001716458
chr16:
31271288-31271413
126
ITAM_HUMAN
1-10
10
0
-
-
1.2
ENST00000287497
2
ENSE00001304825
chr16:
31273013-31273118
106
ITAM_HUMAN
10-45
36
0
-
-
1.3
ENST00000287497
3
ENSE00001802514
chr16:
31276716-31276819
104
ITAM_HUMAN
45-80
36
0
-
-
1.4
ENST00000287497
4
ENSE00001675692
chr16:
31277132-31277202
71
ITAM_HUMAN
80-103
24
0
-
-
1.5
ENST00000287497
5
ENSE00001028855
chr16:
31277351-31277468
118
ITAM_HUMAN
104-143
40
0
-
-
1.6
ENST00000287497
6
ENSE00001028857
chr16:
31282275-31282405
131
ITAM_HUMAN
143-186
44
1
A:132-170 (gaps)
43
1.7
ENST00000287497
7
ENSE00001191919
chr16:
31283168-31283313
146
ITAM_HUMAN
187-235
49
1
A:171-219
49
1.8
ENST00000287497
8
ENSE00001028975
chr16:
31284686-31284839
154
ITAM_HUMAN
235-286
52
1
A:219-270
52
1.9
ENST00000287497
9
ENSE00001028959
chr16:
31286870-31287020
151
ITAM_HUMAN
287-337
51
1
A:271-315
45
1.10
ENST00000287497
10
ENSE00001028953
chr16:
31287992-31288065
74
ITAM_HUMAN
337-361
25
0
-
-
1.11
ENST00000287497
11
ENSE00001028971
chr16:
31288241-31288370
130
ITAM_HUMAN
362-405
44
0
-
-
1.12
ENST00000287497
12
ENSE00001191904
chr16:
31289288-31289430
143
ITAM_HUMAN
405-452
48
0
-
-
1.13
ENST00000287497
13
ENSE00001691688
chr16:
31308835-31308975
141
ITAM_HUMAN
453-499
47
0
-
-
1.14
ENST00000287497
14
ENSE00001709132
chr16:
31309066-31309275
210
ITAM_HUMAN
500-569
70
0
-
-
1.15
ENST00000287497
15
ENSE00001028860
chr16:
31332562-31332692
131
ITAM_HUMAN
570-613
44
0
-
-
1.16
ENST00000287497
16
ENSE00001191889
chr16:
31332785-31332948
164
ITAM_HUMAN
613-668
56
0
-
-
1.17
ENST00000287497
17
ENSE00001191883
chr16:
31335720-31335874
155
ITAM_HUMAN
668-719
52
0
-
-
1.18
ENST00000287497
18
ENSE00001028868
chr16:
31335972-31336103
132
ITAM_HUMAN
720-763
44
0
-
-
1.19
ENST00000287497
19
ENSE00001028854
chr16:
31336279-31336352
74
ITAM_HUMAN
764-788
25
0
-
-
1.20
ENST00000287497
20
ENSE00001028859
chr16:
31336584-31336725
142
ITAM_HUMAN
788-835
48
0
-
-
1.21
ENST00000287497
21
ENSE00001028853
chr16:
31336821-31336943
123
ITAM_HUMAN
836-876
41
0
-
-
1.22
ENST00000287497
22
ENSE00001242102
chr16:
31338177-31338256
80
ITAM_HUMAN
877-903
27
0
-
-
1.23
ENST00000287497
23
ENSE00001191849
chr16:
31339468-31339551
84
ITAM_HUMAN
903-931
29
0
-
-
1.24
ENST00000287497
24
ENSE00001242085
chr16:
31340549-31340624
76
ITAM_HUMAN
931-956
26
0
-
-
1.25
ENST00000287497
25
ENSE00001242076
chr16:
31341119-31341226
108
ITAM_HUMAN
957-992
36
0
-
-
1.26
ENST00000287497
26
ENSE00001191843
chr16:
31341402-31341485
84
ITAM_HUMAN
993-1020
28
0
-
-
1.27
ENST00000287497
27
ENSE00001191837
chr16:
31341629-31341742
114
ITAM_HUMAN
1021-1058
38
0
-
-
1.28
ENST00000287497
28
ENSE00001191835
chr16:
31341825-31341926
102
ITAM_HUMAN
1059-1092
34
0
-
-
1.29
ENST00000287497
29
ENSE00001191829
chr16:
31342486-31342596
111
ITAM_HUMAN
1093-1129
37
0
-
-
1.30
ENST00000287497
30
ENSE00001330465
chr16:
31342957-31344213
1257
ITAM_HUMAN
1130-1152
23
0
-
-
[
close EXON info
]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1n9za_ (A:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
vWA-like
(111)
Superfamily
:
vWA-like
(111)
Family
:
Integrin A (or I) domain
(84)
Protein domain
:
Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit)
(11)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d1n9za_
A:
[
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]
CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1n9zA00 (A:132-315)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.410, no name defined]
(87)
Human (Homo sapiens)
(66)
1a
1n9zA00
A:132-315
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
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]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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Asym.Unit (36 KB)
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