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1N97
Asym. Unit
Info
Asym.Unit (147 KB)
Biol.Unit 1 (70 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CYP175A1 FROM THERMUS THERMOPHILLUS STRAIN HB27
Authors
:
J. K. Yano, F. Blasco, H. Li, R. D. Schmid, A. Henne, T. L. Poulos
Date
:
22 Nov 02 (Deposition) - 25 Feb 03 (Release) - 01 Feb 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
P450, Electron Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. K. Yano, F. Blasco, H. Li, R. D. Schmid, A. Henne, T. L. Poulos
Preliminary Characterization And Crystal Structure Of A Thermostable Cytochrome P450 From Thermus Thermophilus
J. Biol. Chem. V. 278 608 2003
[
close entry info
]
Hetero Components
(3, 22)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3a: S,R MESO-TARTARIC ACID (SRTa)
3b: S,R MESO-TARTARIC ACID (SRTb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
18
Ligand/Ion
1,2-ETHANEDIOL
2
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
SRT
2
Ligand/Ion
S,R MESO-TARTARIC ACID
[
close Hetero Component info
]
Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:259 , ARG A:319 , GLY A:320 , THR A:321 , ARG A:339 , HOH A:738 , HOH A:867 , HOH A:917
BINDING SITE FOR RESIDUE SRT A 601
02
AC2
SOFTWARE
GLN B:259 , ARG B:319 , GLY B:320 , THR B:321 , ARG B:339 , HOH B:766 , HOH B:776 , HOH B:920
BINDING SITE FOR RESIDUE SRT B 602
03
AC3
SOFTWARE
LYS A:63 , TYR A:68 , LEU A:79 , TRP A:87 , ARG A:91 , LEU A:140 , ALA A:221 , GLY A:222 , THR A:225 , ARG A:273 , PRO A:328 , PHE A:329 , GLY A:330 , ARG A:334 , CYS A:336 , GLY A:338 , HOH A:781 , HOH A:784
BINDING SITE FOR RESIDUE HEM A 602
04
AC4
SOFTWARE
LYS B:63 , TYR B:68 , LEU B:79 , LEU B:80 , TRP B:87 , ARG B:91 , LEU B:218 , ALA B:221 , GLY B:222 , THR B:225 , ARG B:273 , PRO B:328 , PHE B:329 , GLY B:330 , ARG B:334 , CYS B:336 , GLY B:338 , HOH B:793 , HOH B:797
BINDING SITE FOR RESIDUE HEM B 603
05
AC5
SOFTWARE
THR B:61 , GLN B:333 , ARG B:334 , HOH B:809 , HOH B:860 , HOH B:940
BINDING SITE FOR RESIDUE EDO B 701
06
AC6
SOFTWARE
SER B:72 , GLY B:76 , ARG B:77 , THR B:81 , HOH B:805
BINDING SITE FOR RESIDUE EDO B 702
07
AC7
SOFTWARE
SER B:204 , LEU B:206 , PRO B:207 , HOH B:719 , HOH B:1017
BINDING SITE FOR RESIDUE EDO B 703
08
AC8
SOFTWARE
ARG B:208 , GLU B:209 , HOH B:773
BINDING SITE FOR RESIDUE EDO B 704
09
AC9
SOFTWARE
THR A:61 , GLN A:333 , ARG A:334
BINDING SITE FOR RESIDUE EDO A 705
10
BC1
SOFTWARE
PHE B:41 , ALA B:64 , THR B:65 , PHE B:66 , THR B:291
BINDING SITE FOR RESIDUE EDO B 706
11
BC2
SOFTWARE
PHE B:117 , GLU B:120 , TRP B:121 , ARG B:126 , GLU B:131 , EDO B:708 , HOH B:758
BINDING SITE FOR RESIDUE EDO B 707
12
BC3
SOFTWARE
GLU B:120 , ARG B:126 , EDO B:707
BINDING SITE FOR RESIDUE EDO B 708
13
BC4
SOFTWARE
GLU B:125 , ARG B:126 , HOH B:850 , HOH B:980 , HOH B:1003
BINDING SITE FOR RESIDUE EDO B 709
14
BC5
SOFTWARE
ALA B:154 , ALA B:157 , LEU B:158 , LEU B:161 , LEU B:219 , VAL B:220 , HIS B:223 , HOH B:819 , HOH B:871
BINDING SITE FOR RESIDUE EDO B 710
15
BC6
SOFTWARE
LEU B:133 , ALA B:134 , LEU B:158 , HIS B:223 , HOH B:796
BINDING SITE FOR RESIDUE EDO B 711
16
BC7
SOFTWARE
HOH B:1010
BINDING SITE FOR RESIDUE EDO B 712
17
BC8
SOFTWARE
GLN A:17 , SER A:170 , LEU A:172
BINDING SITE FOR RESIDUE EDO A 713
18
BC9
SOFTWARE
GLU A:59 , GLY A:60 , LYS A:88 , GLN A:333
BINDING SITE FOR RESIDUE EDO A 714
19
CC1
SOFTWARE
GLN A:67 , VAL A:371 , HOH A:730
BINDING SITE FOR RESIDUE EDO A 715
20
CC2
SOFTWARE
ARG A:104 , HOH A:743
BINDING SITE FOR RESIDUE EDO A 717
21
CC3
SOFTWARE
LEU A:133 , ALA A:134 , LEU A:158 , HIS A:223 , HOH A:751 , HOH A:785
BINDING SITE FOR RESIDUE EDO A 718
22
CC4
SOFTWARE
ARG A:240 , TRP A:243 , ARG A:246 , GLU A:313 , HOH A:847
BINDING SITE FOR RESIDUE EDO A 719
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1n97a_ (A:)
1b: SCOP_d1n97b_ (B:)
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Superfamilies
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(
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
Cytochrome P450
(323)
Protein domain
:
Cyp175a1
(2)
Thermus thermophilus [TaxId: 274]
(2)
1a
d1n97a_
A:
1b
d1n97b_
B:
[
close SCOP info
]
CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1n97A00 (A:1-385)
1b: CATH_1n97B00 (B:1-385)
View:
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Classes
(
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(
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Architectures
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Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Cytochrome p450
(271)
Homologous Superfamily
:
Cytochrome p450
(271)
Thermus thermophilus hb27. Organism_taxid: 262724. Strain: hb27.
(1)
1a
1n97A00
A:1-385
1b
1n97B00
B:1-385
[
close CATH info
]
Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_p450_1n97B01 (B:189-379)
1b: PFAM_p450_1n97B02 (B:189-379)
1c: PFAM_p450_1n97B03 (B:189-379)
1d: PFAM_p450_1n97B04 (B:189-379)
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Clans
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(
)
Clan
:
no clan defined [family: p450]
(161)
Family
:
p450
(161)
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
(1)
1a
p450-1n97B01
B:189-379
1b
p450-1n97B02
B:189-379
1c
p450-1n97B03
B:189-379
1d
p450-1n97B04
B:189-379
[
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]
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
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